RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 TNFRSF8P28908 595 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 BMI1P35226 326 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ADRA1BP35368 520 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ARL2P36404 184 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 TRIM23P36406 574 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 NUP62P37198 522 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 WNT5AP41221 380 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 PRKCIP41743 596 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 GLUD2P49448 558 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ARSDP51689 593 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CLCN3P51790 818 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 LUMP51884 338 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 EPHA5P54756 1037 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 UBE2HP62256 183 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 XIAPP98170 497 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CYLC2Q14093 348 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CRYMQ14894 314 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 PON2Q15165 354 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CNN3Q15417 329 aaKnown RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 NPY5RQ15761 445 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 TBCEQ15813 527 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 XKR4Q5GH76 650 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SPOUT1Q5T280 376 aaKnown RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ATXN7L2Q5T6C5 722 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 RNASEH2BQ5TBB1 312 aaKnown RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 GRTP1Q5TC63 336 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 GKAP1Q5VSY0 366 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 GTF2IRD2BQ6EKJ0 949 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 BEND4Q6ZU67 534 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 PTCHD4Q6ZW05 846 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 FKBP9P1Q75LS8 142 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 RRAGAQ7L523 313 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 OTOAQ7RTW8 1153 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 HEATR3Q7Z4Q2 680 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 RABEPKQ7Z6M1 372 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 GLRX5Q86SX6 157 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 GTF2IRD2Q86UP8 949 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 RETREG3Q86VR2 466 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF280BQ86YH2 543 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 NELFCDQ8IXH7 590 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SRRM1Q8IYB3 904 aaKnown RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SYCP3Q8IZU3 236 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 GALNT15Q8N3T1 639 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SMG8Q8ND04 991 aaKnown RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 OR8K3Q8NH51 312 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CALML6Q8TD86 181 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 DYDC1Q8WWB3 177 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 PEX13Q92968 403 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ELSPBP1Q96BH3 223 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SLC22A18Q96BI1 424 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SPACA9Q96E40 222 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 DTNBP1Q96EV8 351 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 HES6Q96HZ4 224 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 LOXL4Q96JB6 756 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 MYADMQ96S97 322 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ABHD1Q96SE0 405 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 MNTQ99583 582 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SELENOSQ9BQE4 189 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 FAM83CQ9BQN1 747 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 COLEC11Q9BWP8 271 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 FUT8Q9BYC5 575 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 TBC1D17Q9HA65 648 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 MRM3Q9HC36 420 aaKnown RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 FBRSL1Q9HCM7 1045 aaKnown RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 EMC7Q9NPA0 242 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 MID1IP1Q9NPA3 183 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ARHGEF3Q9NR81 526 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 GDE1Q9NZC3 331 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 OR6C2Q9NZP2 312 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CYTH4Q9UIA0 394 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SLC13A4Q9UKG4 626 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CDH7Q9ULB5 785 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SATB2Q9UPW6 733 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CAMK2AQ9UQM7 478 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 AKT3Q9Y243 479 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 PCDHB2Q9Y5E7 798 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 FHOD1Q9Y613 1164 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CLCA3PQ9Y6N3 262 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 FAM169AQ9Y6X4 670 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 COMMD3-BMI1R4GMX3 469 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 EML5Q05BV3 1969 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 COL4A3Q01955 1670 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 KANSL1LA0AUZ9 987 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 TTC26A0AVF1 554 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 TARSL2A2RTX5 802 aaKnown RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 FAM234BA2RU67 622 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 PTGES3LE9PB15 166 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 H0YIV9 168 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 NRP1O14786 923 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SUSD5O60279 629 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 PHACTR2O75167 634 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 TSPAN9O75954 239 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 GLUD1P00367 558 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CYP1A1P04798 512 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ANXA6P08133 673 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ACADMP11310 421 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ODC1P11926 461 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 TFE3P19532 575 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CTNNA2P26232 953 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms