RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 MMP12P39900 470 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ZNF135P52742 658 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ADKP55263 362 aaKnown RBP11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ZBED6P86452 979 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 IL10RBQ08334 325 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 C1orf61Q13536 156 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ACAP1Q15027 740 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 LRRC14Q15048 493 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 DPYSL2Q16555 572 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CDKN3Q16667 212 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 BOLA3Q53S33 107 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PRRT3Q5FWE3 981 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 FAXCQ5TGI0 409 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 TXNRD3NBQ6F5E7 133 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ZCCHC8Q6NZY4 707 aaKnown RBP11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ERAP2Q6P179 960 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 MACC1Q6ZN28 852 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 NYAP1Q6ZVC0 841 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 POLNQ7Z5Q5 900 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PHACTR4Q8IZ21 702 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CACTIN-AS1Q8N1I8 211 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 BTN2A2Q8WVV5 523 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 TUBGCP5Q96RT8 1024 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 NRSN2Q9GZP1 204 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 SPASTQ9UBP0 616 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 APOBEC3BQ9UH17 382 aaKnown RBP11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CAPN11Q9UMQ6 739 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ATP8A1Q9Y2Q0 1164 aa11.98□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PIEZO2Q9H5I5 2752 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CPED1A4D0V7 1026 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 GOLGA6L19H0YKK7 550 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 TLX3O43711 291 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 LZTS3O60299 673 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 RARAP10276 462 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ARL4AP40617 200 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 SCNN1BP51168 640 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 DUSP3P51452 185 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 BCL2L1Q07817 233 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 NSUN2Q08J23 767 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 SLC10A7Q0GE19 358 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PIGHQ14442 188 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 INPP5AQ14642 412 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 RFTN1Q14699 578 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 LBRQ14739 615 aaKnown RBP11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 RTP5Q14D33 572 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 TCEA2Q15560 299 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 NFKBIBQ15653 356 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CDCP2Q5VXM1 449 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 LZTR1Q8N653 840 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PAF1Q8N7H5 531 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 IFI44Q8TCB0 444 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 TSACCQ96A04 125 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ECHDC3Q96DC8 303 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 DCBLD2Q96PD2 775 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CSPG4P5Q96PW8 444 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 IL12RB2Q99665 862 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 LRRC61Q9BV99 259 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 NUP85Q9BW27 656 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 SLC13A1Q9BZW2 595 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CLPBQ9H078 707 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 USP29Q9HBJ7 922 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 SCUBE2Q9NQ36 999 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 IFNKQ9P0W0 207 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 SEPT3Q9UH03 358 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ANAPC7Q9UJX3 599 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 LUC7L2Q9Y383 392 aaKnown RBP11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 OR1A2Q9Y585 309 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PCDHB1Q9Y5F3 818 aa11.97□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ZFC3H1O60293 1989 aaKnown RBP11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 A8MX80 341 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 LMO7DNF2Z398 122 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 TOR1BO14657 336 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 YY2O15391 372 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 BRINP1O60477 761 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PEX11BO96011 259 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 GYPCP04921 128 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PCCBP05166 539 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CYP1A2P05177 515 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 GP1BAP07359 652 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CELA2BP08218 269 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 HOXB3P14651 431 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 TSHRP16473 764 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 SLC25A11Q02978 314 aaKnown RBP11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PPARDQ03181 441 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 RALGDSQ12967 914 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CCDC122Q5T0U0 273 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 TMCO4Q5TGY1 634 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 GUSBP11Q6P575 273 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 TMCO3Q6UWJ1 677 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 EFL1Q7Z2Z2 1120 aaKnown RBP11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PDZD3Q86UT5 571 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 HID1Q8IV36 788 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 NIPA2Q8N8Q9 360 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PLA2G15Q8NCC3 412 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 MAPK15Q8TD08 544 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ZNF599Q96NL3 588 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PSKH2Q96QS6 385 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 APOOQ9BUR5 198 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ABCG4Q9H172 646 aa11.96□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PCDH18Q9HCL0 1135 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms