RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 MYO6Q9UM54 1294 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 CSNK1G3Q9Y6M4 447 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 U3KQA8 63 aa8.96□□□□□ -0.98
TDP1-208ENST00000553989 GCN1Q92616 2671 aaKnown RBP8.96□□□□□ -0.98
TDP1-208ENST00000553989 TRPM6Q9BX84 2022 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 EME2A4GXA9 379 aaPredicted RBP8.95□□□□□ -0.98
TDP1-208ENST00000553989 EIF3CLB5ME19 914 aaKnown RBP8.95□□□□□ -0.98
TDP1-208ENST00000553989 J3QKU1 62 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 MAP2K7O14733 419 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 SPINT1O43278 529 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 RAMP2O60895 175 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 ZMPSTE24O75844 475 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 LSM8O95777 96 aaKnown RBP8.95□□□□□ -0.98
TDP1-208ENST00000553989 XPAP23025 273 aaPredicted RBP8.95□□□□□ -0.98
TDP1-208ENST00000553989 SDC4P31431 198 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 CDH5P33151 784 aaPredicted RBP8.95□□□□□ -0.98
TDP1-208ENST00000553989 ACVRL1P37023 503 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 GABRB2P47870 512 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 MAPKAPK2P49137 400 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 RAD51Q06609 339 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 EIF2B5Q13144 721 aaKnown RBP8.95□□□□□ -0.98
TDP1-208ENST00000553989 LY6DQ14210 128 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 TCEA2Q15560 299 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 MAP9Q49MG5 647 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 VWA3BQ502W6 1294 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 NAA35Q5VZE5 725 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 CCDC70Q6NSX1 233 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 ESRP1Q6NXG1 681 aaKnown RBP8.95□□□□□ -0.98
TDP1-208ENST00000553989 TTC7BQ86TV6 843 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 IRF2BP1Q8IU81 584 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 PHACTR4Q8IZ21 702 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 EMC1Q8N766 993 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 OR2AP1Q8NGE2 309 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 CPA5Q8WXQ8 436 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 NAT6Q93015 286 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 NT5C3BQ969T7 300 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 GRAMD1AQ96CP6 724 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 KLHL32Q96NJ5 620 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 LENG8Q96PV6 779 aaPredicted RBP8.95□□□□□ -0.98
TDP1-208ENST00000553989 ERGIC2Q96RQ1 377 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 EIF3CQ99613 913 aaKnown RBP8.95□□□□□ -0.98
TDP1-208ENST00000553989 NCAPGQ9BPX3 1015 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 TUBGCP2Q9BSJ2 902 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 DESI2Q9BSY9 194 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 C1QTNF2Q9BXJ5 285 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 OSBPL1AQ9BXW6 950 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 NDST4Q9H3R1 872 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 ASCL3Q9NQ33 180 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 GPR27Q9NS67 375 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 TAB2Q9NYJ8 693 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 SIRPGQ9P1W8 387 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 PPARGC1AQ9UBK2 798 aaKnown RBP8.95□□□□□ -0.98
TDP1-208ENST00000553989 OR12D3Q9UGF7 316 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 KLF15Q9UIH9 416 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 SALL4Q9UJQ4 1053 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 ENTPD2Q9Y5L3 495 aa8.95□□□□□ -0.98
TDP1-208ENST00000553989 TPP1O14773 563 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 BUB1O43683 1085 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 MMP20O60882 483 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 TCEA3O75764 348 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 TM7SF2O76062 418 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 TNFSF15O95150 251 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 POP4O95707 220 aaKnown RBP8.94□□□□□ -0.98
TDP1-208ENST00000553989 IGSF6O95976 241 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 GSRP00390 522 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 MMEP08473 750 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 CTSEP14091 401 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 HNRNPH3P31942 346 aaKnown RBP8.94□□□□□ -0.98
TDP1-208ENST00000553989 IGFALSP35858 605 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 ARHGAP25P42331 645 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 PFN3P60673 137 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 PPARDQ03181 441 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 SPA17Q15506 151 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 LONRF2Q1L5Z9 754 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 C15orf59Q2T9L4 293 aaPredicted RBP8.94□□□□□ -0.98
TDP1-208ENST00000553989 PERM1Q5SV97 790 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 TPRG1LQ5T0D9 272 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 CFAP58Q5T655 872 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 ATXN7L2Q5T6C5 722 aaPredicted RBP8.94□□□□□ -0.98
TDP1-208ENST00000553989 KIAA1614Q5VZ46 1190 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 PAPD7Q5XG87 772 aaKnown RBP8.94□□□□□ -0.98
TDP1-208ENST00000553989 TRNP1Q6NT89 227 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 WDR93Q6P2C0 686 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 PCSK4Q6UW60 755 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 GDPD4Q6W3E5 623 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 CCDC81Q6ZN84 652 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 PHLDB2Q86SQ0 1253 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 NOP9Q86U38 636 aaKnown RBP8.94□□□□□ -0.98
TDP1-208ENST00000553989 SLC35F3Q8IY50 421 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 SLC35F6Q8N357 371 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 WDR36Q8NI36 951 aaKnown RBP8.94□□□□□ -0.98
TDP1-208ENST00000553989 WDR48Q8TAF3 677 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 SCG3Q8WXD2 468 aaKnown RBP8.94□□□□□ -0.98
TDP1-208ENST00000553989 ARHGEF2Q92974 986 aaKnown RBP8.94□□□□□ -0.98
TDP1-208ENST00000553989 ISG20Q96AZ6 181 aaKnown RBP8.94□□□□□ -0.98
TDP1-208ENST00000553989 TBC1D31Q96DN5 1066 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 GDAP1L1Q96MZ0 367 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 SLC46A1Q96NT5 459 aa8.94□□□□□ -0.98
TDP1-208ENST00000553989 KLF6Q99612 283 aaPredicted RBP8.94□□□□□ -0.98
TDP1-208ENST00000553989 CCDC3Q9BQI4 270 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms