RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 RIOK3O14730 519 aaKnown RBP23.44■■□□□ 1.34
NEK9-203ENST00000553945 MMP20O60882 483 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 SOCS5O75159 536 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 HLA-DQB2P05538 268 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 CCDC175P0C221 793 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 CTSKP43235 329 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 DSC2Q02487 901 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 TMEM52BQ4KMG9 183 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 P3H4Q92791 437 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 HAUS1Q96CS2 278 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 C1QTNF2Q9BXJ5 285 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 BRD8Q9H0E9 1235 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 SEPT10Q9P0V9 454 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 PACSIN2Q9UNF0 486 aaPredicted RBP23.44■■□□□ 1.34
NEK9-203ENST00000553945 TMEM131Q92545 1883 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 A0A1W2PQ67 120 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 TM4SF5O14894 197 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 HTRA2O43464 458 aaPredicted RBP23.43■■□□□ 1.34
NEK9-203ENST00000553945 CPP00450 1065 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 CETN2P41208 172 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 CLDN2P57739 230 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 FAM193AP78312 1265 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 IFI35P80217 286 aaPredicted RBP23.43■■□□□ 1.34
NEK9-203ENST00000553945 TRAF2Q12933 501 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 CCDC181Q5TID7 509 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 UBL4BQ8N7F7 174 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 TMEM145Q8NBT3 493 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 ALG3Q92685 438 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 IL12RB2Q99665 862 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 CEP41Q9BYV8 373 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 OSBPL8Q9BZF1 889 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 PCDHB9Q9Y5E1 797 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 RAI2Q9Y5P3 530 aa23.43■■□□□ 1.34
NEK9-203ENST00000553945 MIF4GDA9UHW6 222 aaKnown RBP23.42■■□□□ 1.34
NEK9-203ENST00000553945 RAD51BO15315 384 aa23.42■■□□□ 1.34
NEK9-203ENST00000553945 TM7SF2O76062 418 aa23.42■■□□□ 1.34
NEK9-203ENST00000553945 CES1P23141 567 aa23.42■■□□□ 1.34
NEK9-203ENST00000553945 MMP12P39900 470 aa23.42■■□□□ 1.34
NEK9-203ENST00000553945 ZBTB17Q13105 803 aa23.42■■□□□ 1.34
NEK9-203ENST00000553945 FAM182AQ5T1J6 154 aa23.42■■□□□ 1.34
NEK9-203ENST00000553945 BBS12Q6ZW61 710 aa23.42■■□□□ 1.34
NEK9-203ENST00000553945 DGLUCYQ7Z3D6 616 aa23.42■■□□□ 1.34
NEK9-203ENST00000553945 IQCHQ86VS3 1027 aa23.42■■□□□ 1.34
NEK9-203ENST00000553945 TFB1MQ8WVM0 346 aaKnown RBP23.42■■□□□ 1.34
NEK9-203ENST00000553945 KLHDC7BQ96G42 594 aa23.42■■□□□ 1.34
NEK9-203ENST00000553945 GDF3Q9NR23 364 aa23.42■■□□□ 1.34
NEK9-203ENST00000553945 FNDC3AQ9Y2H6 1198 aaKnown RBP23.42■■□□□ 1.34
NEK9-203ENST00000553945 H0Y8X5 98 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 MAGEC1O60732 1142 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 PYGMP11217 842 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 LIG3P49916 1009 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 NXPH1P58417 271 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 NIPAL4Q0D2K0 466 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 OVGP1Q12889 678 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 PRKD1Q15139 912 aaPredicted RBP23.41■■□□□ 1.34
NEK9-203ENST00000553945 ARMC12Q5T9G4 340 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 ALG1LQ6GMV1 187 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 AADACL2Q6P093 401 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 GCNT7Q6ZNI0 430 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 ZC3H18Q86VM9 953 aaKnown RBP23.41■■□□□ 1.34
NEK9-203ENST00000553945 CNTD1Q8N815 330 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 ASB12Q8WXK4 309 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 ANP32BQ92688 251 aaKnown RBP23.41■■□□□ 1.34
NEK9-203ENST00000553945 AGAP3Q96P47 875 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 LENG8Q96PV6 779 aaPredicted RBP23.41■■□□□ 1.34
NEK9-203ENST00000553945 HERPUD2Q9BSE4 406 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 LZTFL1Q9NQ48 299 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 COQ6Q9Y2Z9 468 aa23.41■■□□□ 1.34
NEK9-203ENST00000553945 A8MX80 341 aa23.4■■□□□ 1.34
NEK9-203ENST00000553945 FPGTO14772 594 aa23.4■■□□□ 1.34
NEK9-203ENST00000553945 PGLSO95336 258 aa23.4■■□□□ 1.34
NEK9-203ENST00000553945 THEGLP0DJG4 465 aa23.4■■□□□ 1.34
NEK9-203ENST00000553945 KCNA4P22459 653 aa23.4■■□□□ 1.34
NEK9-203ENST00000553945 PTPN7P35236 360 aa23.4■■□□□ 1.34
NEK9-203ENST00000553945 ZNF211Q13398 564 aaPredicted RBP23.4■■□□□ 1.34
NEK9-203ENST00000553945 ZNF423Q2M1K9 1284 aa23.4■■□□□ 1.34
NEK9-203ENST00000553945 PRAMEF14Q5SWL7 426 aa23.4■■□□□ 1.34
NEK9-203ENST00000553945 ARRDC2Q8TBH0 407 aa23.4■■□□□ 1.34
NEK9-203ENST00000553945 KLF6Q99612 283 aaPredicted RBP23.4■■□□□ 1.34
NEK9-203ENST00000553945 C1QTNF7Q9BXJ2 289 aa23.4■■□□□ 1.34
NEK9-203ENST00000553945 TM7SF3Q9NS93 570 aa23.4■■□□□ 1.34
NEK9-203ENST00000553945 PHTF1Q9UMS5 762 aa23.4■■□□□ 1.34
NEK9-203ENST00000553945 EFR3BQ9Y2G0 817 aa23.4■■□□□ 1.34
NEK9-203ENST00000553945 HS3ST3A1Q9Y663 406 aa23.4■■□□□ 1.34
NEK9-203ENST00000553945 POM121BA6NF01 834 aa23.39■■□□□ 1.33
NEK9-203ENST00000553945 A6NNZ2 444 aa23.39■■□□□ 1.33
NEK9-203ENST00000553945 APOC4-APOC2K7ER74 178 aa23.39■■□□□ 1.33
NEK9-203ENST00000553945 DDX3YO15523 660 aaKnown RBP23.39■■□□□ 1.33
NEK9-203ENST00000553945 LZTS3O60299 673 aaPredicted RBP23.39■■□□□ 1.33
NEK9-203ENST00000553945 APOC2P02655 101 aa23.39■■□□□ 1.33
NEK9-203ENST00000553945 C6P13671 934 aa23.39■■□□□ 1.33
NEK9-203ENST00000553945 CD59P13987 128 aa23.39■■□□□ 1.33
NEK9-203ENST00000553945 SLC14A1Q13336 389 aa23.39■■□□□ 1.33
NEK9-203ENST00000553945 IHHQ14623 411 aa23.39■■□□□ 1.33
NEK9-203ENST00000553945 DPPA4Q7L190 304 aa23.39■■□□□ 1.33
NEK9-203ENST00000553945 PTAR1Q7Z6K3 402 aaPredicted RBP23.39■■□□□ 1.33
NEK9-203ENST00000553945 ABI3BPQ7Z7G0 1075 aa23.39■■□□□ 1.33
NEK9-203ENST00000553945 SPATS2Q86XZ4 545 aaKnown RBP23.39■■□□□ 1.33
NEK9-203ENST00000553945 DENND6BQ8NEG7 585 aa23.39■■□□□ 1.33
NEK9-203ENST00000553945 OR13H1Q8NG92 308 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms