RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ATP13A3Q9H7F0 1226 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 TIMMDC1Q9NPL8 285 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 KLHL11Q9NVR0 708 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 SARDHQ9UL12 918 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 DMTF1Q9Y222 760 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-209ENST00000553855 ALG6Q9Y672 507 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 FANCMQ8IYD8 2048 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 MYO18AQ92614 2054 aaKnown RBP8.43□□□□□ -1.06
PSEN1-209ENST00000553855 A0A1W2PPC4 97 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 C16orf96A6NNT2 1141 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 BTNL10A8MVZ5 291 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 PATE3B3GLJ2 98 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 PLK4O00444 970 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 PPP1R12AO14974 1030 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-209ENST00000553855 TSPAN6O43657 245 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 KRT86O43790 486 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 BUB1BO60566 1050 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-209ENST00000553855 OPHN1O60890 802 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 ZRANB2O95218 330 aaKnown RBP eCLIP8.43□□□□□ -1.06
PSEN1-209ENST00000553855 CER1O95813 267 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 CD160O95971 181 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 CTSLP07711 333 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 ADRB3P13945 408 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 MSX1P28360 303 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 AKT2P31751 481 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 DRD3P35462 400 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 CSNK1DP48730 415 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 SCNN1BP51168 640 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 AP1S1P61966 158 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 RPS21P63220 83 aaKnown RBP8.43□□□□□ -1.06
PSEN1-209ENST00000553855 RACK1P63244 317 aaKnown RBP8.43□□□□□ -1.06
PSEN1-209ENST00000553855 IRX4P78413 519 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 NSUN2Q08J23 767 aaKnown RBP eCLIP8.43□□□□□ -1.06
PSEN1-209ENST00000553855 ELP6Q0PNE2 266 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 SUZ12Q15022 739 aaKnown RBP8.43□□□□□ -1.06
PSEN1-209ENST00000553855 PAFAH1B3Q15102 231 aaKnown RBP8.43□□□□□ -1.06
PSEN1-209ENST00000553855 CYTH1Q15438 398 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 ATP13A4Q4VNC1 1196 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 RALGPS1Q5JS13 557 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 STPG1Q5TH74 334 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 AGBL4Q5VU57 503 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 PEAR1Q5VY43 1037 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-209ENST00000553855 AFMIDQ63HM1 303 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 TCEAL6Q6IPX3 200 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 KIAA1161Q6NSJ0 714 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 BRAT1Q6PJG6 821 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 RAD9BQ6WBX8 426 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 SRLQ86TD4 932 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 TRIM69Q86WT6 500 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 HORMAD1Q86X24 394 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 ARHGAP12Q8IWW6 846 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 NDUFAF2Q8N183 169 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 NPWQ8N729 165 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 UBL4BQ8N7F7 174 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 ACRBPQ8NEB7 543 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 FAM71BQ8TC56 605 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 HCAR2Q8TDS4 363 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 CXorf40AQ8TE69 158 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 TCEAL3Q969E4 200 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 ARRDC3Q96B67 414 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 SERAC1Q96JX3 654 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 EXOC2Q96KP1 924 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 ZNF641Q96N77 438 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-209ENST00000553855 RNF157Q96PX1 679 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 CPEB1Q9BZB8 566 aaKnown RBP8.43□□□□□ -1.06
PSEN1-209ENST00000553855 KLC2Q9H0B6 622 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 BRD8Q9H0E9 1235 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 ACBD3Q9H3P7 528 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 SLC32A1Q9H598 525 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 PDFQ9HBH1 243 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 CAPN10Q9HC96 672 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 TMEM74BQ9NUR3 256 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 ETNK2Q9NVF9 386 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 GMPR2Q9P2T1 348 aaKnown RBP8.43□□□□□ -1.06
PSEN1-209ENST00000553855 SERGEFQ9UGK8 458 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 AMFRQ9UKV5 643 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 MFHAS1Q9Y4C4 1052 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 TTLL3Q9Y4R7 772 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 HEY1Q9Y5J3 304 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 ACTL7AQ9Y615 435 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 WDFY4Q6ZS81 3184 aa8.43□□□□□ -1.06
PSEN1-209ENST00000553855 USP34Q70CQ2 3546 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 A0A1W2PNR3 127 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 A0A1W2PQU0 124 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 LNP1A1A4G5 178 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 CCDC66A2RUB6 948 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 C4orf47A7E2U8 309 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 PRAMEF26H0Y7S4 382 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 SLC30A4O14863 429 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 MATN3O15232 486 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 ARHGAP6O43182 974 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 AP1G1O43747 822 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 DFNA5O60443 496 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 ZNF821O75541 412 aaPredicted RBP8.42□□□□□ -1.06
PSEN1-209ENST00000553855 CD48P09326 243 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 TGM1P22735 817 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 CES1P23141 567 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 CCNCP24863 283 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 CTNNA2P26232 953 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms