RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 CDH18Q13634 790 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 P3H1Q32P28 736 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 KRT71Q3SY84 523 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 CCDC157Q569K6 752 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 FSCBQ5H9T9 825 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 MS4A13Q5J8X5 152 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 SLC9A4Q6AI14 798 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 DHRS13Q6UX07 377 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 KDM7AQ6ZMT4 941 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 CYP4V2Q6ZWL3 525 aaPredicted RBP16.25■□□□□ 0.19
ACTN1-209ENST00000553659 TMPRSS12Q86WS5 348 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 MMAAQ8IVH4 418 aaKnown RBP16.25■□□□□ 0.19
ACTN1-209ENST00000553659 OR2T34Q8NGX1 318 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 FAM149B1Q96BN6 582 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 MYEOVQ96EZ4 313 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 PGM2Q96G03 612 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 SLC39A13Q96H72 371 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 LRIG1Q96JA1 1093 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 SLC6A18Q96N87 628 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 SERPINB11Q96P15 392 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 ELF4Q99607 663 aaPredicted RBP16.25■□□□□ 0.19
ACTN1-209ENST00000553659 OMDQ99983 421 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 CCDC77Q9BR77 488 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 SNRNP25Q9BV90 132 aaKnown RBP16.25■□□□□ 0.19
ACTN1-209ENST00000553659 EBF2Q9HAK2 575 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 FZD4Q9ULV1 537 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 PCDHGA1Q9Y5H4 931 aa16.25■□□□□ 0.19
ACTN1-209ENST00000553659 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-209ENST00000553659 EDDM13A0A1B0GTR0 161 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 EIF3HO15372 352 aaKnown RBP eCLIP16.24■□□□□ 0.19
ACTN1-209ENST00000553659 LUC7L3O95232 432 aaKnown RBP16.24■□□□□ 0.19
ACTN1-209ENST00000553659 WNT1P04628 370 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 IVLP07476 585 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 ABHD2P08910 425 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 SULT1E1P49888 294 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 CCR5P51681 352 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 DYNLT1P63172 113 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 XRCC4Q13426 336 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 TAF5Q15542 800 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 DCAF6Q58WW2 860 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 PITRM1Q5JRX3 1037 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 PRAMEF14Q5SWL7 426 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 BEND5Q7L4P6 421 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 GATAD2AQ86YP4 633 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 CFAP52Q8N1V2 620 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 DQX1Q8TE96 717 aaKnown RBP16.24■□□□□ 0.19
ACTN1-209ENST00000553659 NT5C3BQ969T7 300 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 ARL8AQ96BM9 186 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 FAM129BQ96TA1 746 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 FRMD8Q9BZ67 464 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-209ENST00000553659 PPCSQ9HAB8 311 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-209ENST00000553659 NAALADL1Q9UQQ1 740 aa16.24■□□□□ 0.19
ACTN1-209ENST00000553659 A0A087WV48 116 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 TTC34A8MYJ7 566 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 RNASEH2AO75792 299 aaKnown RBP16.23■□□□□ 0.19
ACTN1-209ENST00000553659 F9P00740 461 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 RBP3P10745 1247 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 CDK4P11802 303 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 GOT1P17174 413 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 CD38P28907 300 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 ARL4AP40617 200 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 CTSOP43234 321 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-209ENST00000553659 LMAN1P49257 510 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 ECT2LQ008S8 904 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 GPS1Q13098 491 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 TRIP13Q15645 432 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-209ENST00000553659 ANKRD20A8PQ5CZ79 823 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 PPP1R21Q6ZMI0 780 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 LEKR1Q6ZMV7 388 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 BNIPLQ7Z465 357 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 CDKL3Q8IVW4 592 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-209ENST00000553659 PPIL6Q8IXY8 311 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 DEFB106AQ8N104 65 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 NTAN1Q96AB6 310 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 PGAP3Q96FM1 320 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-209ENST00000553659 NPY6RQ99463 290 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 FERMT1Q9BQL6 677 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 CDC42EP4Q9H3Q1 356 aaKnown RBP16.23■□□□□ 0.19
ACTN1-209ENST00000553659 CNOT10Q9H9A5 744 aaKnown RBP16.23■□□□□ 0.19
ACTN1-209ENST00000553659 AASDHPPTQ9NRN7 309 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 PAK5Q9P286 719 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 SLCO3A1Q9UIG8 710 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 AP4E1Q9UPM8 1137 aa16.23■□□□□ 0.19
ACTN1-209ENST00000553659 ARID1BQ8NFD5 2236 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-209ENST00000553659 A0A1W2PR77 199 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 CAPN9O14815 690 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 YKT6O15498 198 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 TCEA3O75764 348 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 LDOC1O95751 146 aaPredicted RBP16.22■□□□□ 0.19
ACTN1-209ENST00000553659 TTC4O95801 387 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 AGTP01019 485 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 CD48P09326 243 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 C1SP09871 688 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 TSHRP16473 764 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 NR1D1P20393 614 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 C5AR1P21730 350 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 DMTNQ08495 405 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 SLC29A2Q14542 456 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 SHBQ15464 509 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms