RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 WDR92Q96MX6 357 aa9.7□□□□□ -0.86
CHD8-205ENST00000553651 SPON2Q9BUD6 331 aa9.7□□□□□ -0.86
CHD8-205ENST00000553651 WRAP53Q9BUR4 548 aaKnown RBP9.7□□□□□ -0.86
CHD8-205ENST00000553651 C1QTNF7Q9BXJ2 289 aa9.7□□□□□ -0.86
CHD8-205ENST00000553651 TKTL2Q9H0I9 626 aa9.7□□□□□ -0.86
CHD8-205ENST00000553651 TMEM168Q9H0V1 697 aa9.7□□□□□ -0.86
CHD8-205ENST00000553651 UPF2Q9HAU5 1272 aaKnown RBP9.7□□□□□ -0.86
CHD8-205ENST00000553651 ATP13A1Q9HD20 1204 aa9.7□□□□□ -0.86
CHD8-205ENST00000553651 CUEDC1Q9NWM3 386 aaPredicted RBP9.7□□□□□ -0.86
CHD8-205ENST00000553651 OCIAD1Q9NX40 245 aa9.7□□□□□ -0.86
CHD8-205ENST00000553651 ARMCX3Q9UH62 379 aaPredicted RBP9.7□□□□□ -0.86
CHD8-205ENST00000553651 KCNMB2Q9Y691 235 aa9.7□□□□□ -0.86
CHD8-205ENST00000553651 ZNF106Q9H2Y7 1883 aaKnown RBP9.7□□□□□ -0.86
CHD8-205ENST00000553651 PDZD2O15018 2839 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 B4DGG1 531 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 KRIT1O00522 736 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 LETM1O95202 739 aaPredicted RBP9.69□□□□□ -0.86
CHD8-205ENST00000553651 POP4O95707 220 aaKnown RBP9.69□□□□□ -0.86
CHD8-205ENST00000553651 TNFP01375 233 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 PDGFAP04085 211 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 THRAP10827 490 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 BMP6P22004 513 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 TNFRSF8P28908 595 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 PRCPP42785 496 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 SQSTM1Q13501 440 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 TRA2AQ13595 282 aaKnown RBP eCLIP9.69□□□□□ -0.86
CHD8-205ENST00000553651 AMZ1Q400G9 498 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 EFHC1Q5JVL4 640 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 ATXN7L2Q5T6C5 722 aaPredicted RBP9.69□□□□□ -0.86
CHD8-205ENST00000553651 ANKRD40Q6AI12 368 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 SLC26A9Q7LBE3 791 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 TAF8Q7Z7C8 310 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 TTC7BQ86TV6 843 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 NRROSQ86YC3 692 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 IRF2BP1Q8IU81 584 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 UNC5BQ8IZJ1 945 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 PLA2G15Q8NCC3 412 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 ZNF397Q8NF99 534 aaPredicted RBP9.69□□□□□ -0.86
CHD8-205ENST00000553651 OR2AP1Q8NGE2 309 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 CXorf40AQ8TE69 158 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 PGAP3Q96FM1 320 aaPredicted RBP9.69□□□□□ -0.86
CHD8-205ENST00000553651 OSBPL1AQ9BXW6 950 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 GPN2Q9H9Y4 310 aaPredicted RBP9.69□□□□□ -0.86
CHD8-205ENST00000553651 MRPL40Q9NQ50 206 aaKnown RBP9.69□□□□□ -0.86
CHD8-205ENST00000553651 SPATS2LQ9NUQ6 558 aaKnown RBP9.69□□□□□ -0.86
CHD8-205ENST00000553651 NDFIP2Q9NV92 336 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 AKAP7Q9P0M2 348 aaPredicted RBP9.69□□□□□ -0.86
CHD8-205ENST00000553651 TMEM9Q9P0T7 183 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 DKK3Q9UBP4 350 aa9.69□□□□□ -0.86
CHD8-205ENST00000553651 HIVEP1P15822 2718 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 WIPF3A6NGB9 483 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 B4E171 279 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 ERBB2P04626 1255 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 FGF1P05230 155 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 NEFLP07196 543 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 F8A1P23610 371 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 HTR1BP28222 390 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 TSPAN7P41732 249 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 NDUFA8P51970 172 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 KIAA1024LP59773 190 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 FKBP3Q00688 224 aaKnown RBP9.68□□□□□ -0.86
CHD8-205ENST00000553651 MTM1Q13496 603 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 COBLL1Q53SF7 1204 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 ANKS6Q68DC2 871 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 GDPD4Q6W3E5 623 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 C11orf57Q6ZUT1 292 aaPredicted RBP9.68□□□□□ -0.86
CHD8-205ENST00000553651 MAMDC2Q7Z304 686 aaPredicted RBP9.68□□□□□ -0.86
CHD8-205ENST00000553651 BNIPLQ7Z465 357 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 RYBPQ8N488 228 aaPredicted RBP9.68□□□□□ -0.86
CHD8-205ENST00000553651 AGBL5Q8NDL9 886 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 OR4D9Q8NGE8 314 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 STARD8Q92502 1023 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 CCDC47Q96A33 483 aaKnown RBP9.68□□□□□ -0.86
CHD8-205ENST00000553651 RTP4Q96DX8 246 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 ZNF768Q9H5H4 540 aaKnown RBP9.68□□□□□ -0.86
CHD8-205ENST00000553651 WDCPQ9H6R7 721 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 PRDM8Q9NQV8 689 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 SLC39A1Q9NY26 324 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 PDP2Q9P2J9 529 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 NEU3Q9UQ49 428 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 ST14Q9Y5Y6 855 aa9.68□□□□□ -0.86
CHD8-205ENST00000553651 TNRC6AQ8NDV7 1962 aaKnown RBP9.67□□□□□ -0.86
CHD8-205ENST00000553651 TSPAN11A1L157 253 aa9.67□□□□□ -0.86
CHD8-205ENST00000553651 TRIM49BA6NDI0 452 aa9.67□□□□□ -0.86
CHD8-205ENST00000553651 BECN2A8MW95 431 aa9.67□□□□□ -0.86
CHD8-205ENST00000553651 TNFRSF10CO14798 259 aa9.67□□□□□ -0.86
CHD8-205ENST00000553651 THAP12O43422 761 aa9.67□□□□□ -0.86
CHD8-205ENST00000553651 MED7O43513 233 aa9.67□□□□□ -0.86
CHD8-205ENST00000553651 VPS4BO75351 444 aa9.67□□□□□ -0.86
CHD8-205ENST00000553651 DLGAP3O95886 979 aa9.67□□□□□ -0.86
CHD8-205ENST00000553651 F13A1P00488 732 aa9.67□□□□□ -0.86
CHD8-205ENST00000553651 FUCA1P04066 466 aa9.67□□□□□ -0.86
CHD8-205ENST00000553651 FURINP09958 794 aa9.67□□□□□ -0.86
CHD8-205ENST00000553651 GM2AP17900 193 aa9.67□□□□□ -0.86
CHD8-205ENST00000553651 MAP4P27816 1152 aaKnown RBP9.67□□□□□ -0.86
CHD8-205ENST00000553651 ALDH4A1P30038 563 aa9.67□□□□□ -0.86
CHD8-205ENST00000553651 SNRPD1P62314 119 aaKnown RBP9.67□□□□□ -0.86
CHD8-205ENST00000553651 SLC6A3Q01959 620 aa9.67□□□□□ -0.86
CHD8-205ENST00000553651 DNM1Q05193 864 aaKnown RBP9.67□□□□□ -0.86
CHD8-205ENST00000553651 ABHD18Q0P651 414 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms