RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SLC26A7Q8TE54 656 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 DLG3Q92796 817 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 ASB2Q96Q27 587 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 UTP6Q9NYH9 597 aaKnown RBP13□□□□□ -0.33
SHMT2-205ENST00000553474 MPP6Q9NZW5 540 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 SLC2A6Q9UGQ3 507 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 PPM1HQ9ULR3 514 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 SUFUQ9UMX1 484 aa13□□□□□ -0.33
SHMT2-205ENST00000553474 HLA-DPA1P20036 260 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 EPHA3P29320 983 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 AVPR1AP37288 418 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 NUDT2P50583 147 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 CLCN2P51788 898 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 IRX1P78414 480 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-205ENST00000553474 ACVR1Q04771 509 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 CDC16Q13042 620 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 FAM45BPQ6NSW5 357 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 BNC2Q6ZN30 1099 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-205ENST00000553474 TRIM67Q6ZTA4 783 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 C14orf80Q86SX3 495 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 MFSD6LQ8IWD5 586 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 FAM45AQ8TCE6 357 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 HEXDCQ8WVB3 486 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 CEP295NLQ96MC4 621 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 ZNF599Q96NL3 588 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 SEZ6LQ9BYH1 1024 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 NUF2Q9BZD4 464 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 KLHL4Q9C0H6 718 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 POMKQ9H5K3 350 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 WDR55Q9H6Y2 383 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-205ENST00000553474 CYP4F11Q9HBI6 524 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 POPDC3Q9HBV1 291 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 TLR8Q9NR97 1041 aaKnown RBP12.99□□□□□ -0.33
SHMT2-205ENST00000553474 IGSF5Q9NSI5 407 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 CHD5Q8TDI0 1954 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 GREB1Q4ZG55 1949 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 LOC285095A0A1B0GVY8 99 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 IGLV3-27P01718 113 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 YWHAQP27348 245 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 NFKB2Q00653 900 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 DLG1Q12959 904 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 MRPL58Q14197 206 aaKnown RBP12.99□□□□□ -0.33
SHMT2-205ENST00000553474 CHSY3Q70JA7 882 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 SNX32Q86XE0 403 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 HPS6Q86YV9 775 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 DSELQ8IZU8 1212 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 CATSPER1Q8NEC5 780 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 OR13J1Q8NGT2 312 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 GPR150Q8NGU9 434 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 SPPL2BQ8TCT7 592 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 C2orf15Q8WU43 125 aaKnown RBP12.99□□□□□ -0.33
SHMT2-205ENST00000553474 HMCESQ96FZ2 354 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 SPATA17Q96L03 361 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 FAM193BQ96PV7 902 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-205ENST00000553474 BTBD9Q96Q07 612 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 CDK5RAP1Q96SZ6 601 aaKnown RBP12.99□□□□□ -0.33
SHMT2-205ENST00000553474 POLR1EQ9GZS1 481 aaKnown RBP12.99□□□□□ -0.33
SHMT2-205ENST00000553474 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.99□□□□□ -0.33
SHMT2-205ENST00000553474 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
SHMT2-205ENST00000553474 CCDC78A2IDD5 438 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 DPPA5A6NC42 116 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 RAMP2O60895 175 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 FGF1P05230 155 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 MMP2P08253 660 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 SP100P23497 879 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-205ENST00000553474 CD86P42081 329 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 PSMD8P48556 350 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 PGFP49763 221 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 INHBCP55103 352 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 NAA20P61599 178 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 PRAMEP78395 509 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 STX5Q13190 355 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 PIGGQ5H8A4 983 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 ZNF280DQ6N043 979 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 ANKRD33Q7Z3H0 272 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 UBE2Q1Q7Z7E8 422 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 PDSS2Q86YH6 399 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 KBTBD2Q8IY47 623 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 PELI3Q8N2H9 469 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.98□□□□□ -0.33
SHMT2-205ENST00000553474 SLC25A41Q8N5S1 370 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 CCNYL1Q8N7R7 359 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 TXNDC5Q8NBS9 432 aaKnown RBP12.98□□□□□ -0.33
SHMT2-205ENST00000553474 PYDC1Q8WXC3 89 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 FEM1CQ96JP0 617 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 FAM192AQ9GZU8 254 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 ELAC1Q9H777 363 aaKnown RBP12.98□□□□□ -0.33
SHMT2-205ENST00000553474 MEAF6Q9HAF1 191 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 NT5MQ9NPB1 228 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 PSMD13Q9UNM6 376 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 VWA7Q9Y334 891 aa12.98□□□□□ -0.33
SHMT2-205ENST00000553474 VWA8A3KMH1 1905 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 NEMP1O14524 444 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 AIM2O14862 343 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 PDE5AO76074 875 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 WISP3O95389 354 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-205ENST00000553474 CLTBP09497 229 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 PIM1P11309 404 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-205ENST00000553474 CKBP12277 381 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 CDC25CP30307 473 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms