RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	TBC1D3G	Q6DHY5	549 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TBC1D3C	Q6IPX1	549 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	DPPA4	Q7L190	304 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	ABI3BP	Q7Z7G0	1075 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CCDC50	Q8IVM0	306 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TBC1D3	Q8IZP1	549 aa	Predicted RBP	10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	P3H4	Q92791	437 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	HAUS1	Q96CS2	278 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	RMDN1	Q96DB5	314 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TEKT5	Q96M29	485 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	LENG8	Q96PV6	779 aa	Predicted RBP	10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	EDEM2	Q9BV94	578 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	MAK16	Q9BXY0	300 aa	Known RBP	10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CEP41	Q9BYV8	373 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CARD9	Q9H257	536 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	USP29	Q9HBJ7	922 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	R3HDM2	Q9Y2K5	976 aa	Known RBP	10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154		A0A1B0GVT2	93 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154		A0A1W2PQ67	120 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PRR5-ARHGAP8	B1AHC4	643 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PRAMEF26	H0Y7S4	382 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	ARHGAP33	O14559	1287 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SLC30A4	O14863	429 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PRKCG	P05129	697 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	GNS	P15586	552 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CES1	P23141	567 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	MAT2A	P31153	395 aa	Known RBP	10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CSNK1E	P49674	416 aa	Known RBP	10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	AFF3	P51826	1226 aa	Known RBP	10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	NXPH1	P58417	271 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PFN3	P60673	137 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	OTUD4	Q01804	1114 aa	Known RBP	10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PTPRR	Q15256	657 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SHB	Q15464	509 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CDKN3	Q16667	212 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	ZNF423	Q2M1K9	1284 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	KIF19	Q2TAC6	998 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SETMAR	Q53H47	684 aa	Predicted RBP	10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TEX44	Q53QW1	395 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	KDELC1	Q6UW63	502 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	KDM7A	Q6ZMT4	941 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	BZW1	Q7L1Q6	419 aa	Known RBP	10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	DGLUCY	Q7Z3D6	616 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TTC7B	Q86TV6	843 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	IQCH	Q86VS3	1027 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SPATS2	Q86XZ4	545 aa	Known RBP	10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	RGL4	Q8IZJ4	473 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	BBS5	Q8N3I7	341 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	UBL4B	Q8N7F7	174 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TP53I13	Q8NBR0	393 aa	Predicted RBP	10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CCNY	Q8ND76	341 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	DENND6B	Q8NEG7	585 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TRIM58	Q8NG06	486 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	OR2I1P	Q8NGU4	316 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	NETO1	Q8TDF5	533 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	NSMCE1	Q8WV22	266 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TFB1M	Q8WVM0	346 aa	Known RBP	10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SNX19	Q92543	992 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CENPT	Q96BT3	561 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	BMF	Q96LC9	184 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SMIM14	Q96QK8	99 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	LYSMD1	Q96S90	227 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	HINFP	Q9BQA5	517 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	ZDHHC5	Q9C0B5	715 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SLC25A51	Q9H1U9	297 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	GLOD4	Q9HC38	313 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SCUBE2	Q9NQ36	999 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	DNAAF2	Q9NVR5	837 aa	Known RBP	10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	B4GALT6	Q9UBX8	382 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PYCARD	Q9ULZ3	195 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CA5B	Q9Y2D0	317 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	RAI2	Q9Y5P3	530 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	ZFYVE26	Q68DK2	2539 aa		10.18	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CEP192	Q8TEP8	1941 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	IGLON5	A6NGN9	336 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CAPN8	A6NHC0	703 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	NPIPB15	A6NHN6	443 aa	Predicted RBP	10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	USP27X	A6NNY8	438 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	MTSS1	O43312	755 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TJP3	O95049	919 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CP	P00450	1065 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CFI	P05156	583 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	C6	P13671	934 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	HNRNPA2B1	P22626	353 aa	Known RBP	10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	RBL1	P28749	1068 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	IGFALS	P35858	605 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	RPL26	P61254	145 aa	Known RBP	10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	ARHGAP8	P85298	464 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	ELP6	Q0PNE2	266 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	AP1B1	Q10567	949 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	OVGP1	Q12889	678 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CNGA3	Q16281	694 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TPRG1L	Q5T0D9	272 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	STPG1	Q5TH74	334 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	LIPI	Q6XZB0	460 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	KYAT3	Q6YP21	454 aa	Known RBP	10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	DBX2	Q6ZNG2	339 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	KANSL1	Q7Z3B3	1105 aa		10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	ZC3H18	Q86VM9	953 aa	Known RBP	10.17	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SLC13A5	Q86YT5	568 aa	Predicted RBP	10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms