RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 SLC10A2Q12908 348 aaPredicted RBP10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 MPP3Q13368 585 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 PEX6Q13608 980 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 LPAL2Q16609 132 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 DRICH1Q6PGQ1 229 aaPredicted RBP10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 ARHGAP36Q6ZRI8 547 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 ASCL5Q7RTU5 278 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 PID1Q7Z2X4 250 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 ZC3H18Q86VM9 953 aaKnown RBP10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 CAMK1DQ8IU85 385 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 SLC41A1Q8IVJ1 513 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 OR6K2Q8NGY2 324 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 ACTL9Q8TC94 416 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 PDCD6IPQ8WUM4 868 aaKnown RBP10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 ALG3Q92685 438 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 ARRDC3Q96B67 414 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 TRIM44Q96DX7 344 aaPredicted RBP10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 IMP4Q96G21 291 aaKnown RBP10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 EXOC2Q96KP1 924 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 C19orf43Q9BQ61 176 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 C1QTNF2Q9BXJ5 285 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 GOLPH3Q9H4A6 298 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 NOD2Q9HC29 1040 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 GLOD4Q9HC38 313 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 TMEM9BQ9NQ34 198 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 GDF3Q9NR23 364 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 KCND1Q9NSA2 647 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 EVA1BQ9NVM1 165 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 CDV3Q9UKY7 258 aaKnown RBP10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 TTC7AQ9ULT0 858 aaPredicted RBP10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 TFR2Q9UP52 801 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 PCDHB9Q9Y5E1 797 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 RAI2Q9Y5P3 530 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 RALGAPA1Q6GYQ0 2036 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 CACNA1EQ15878 2313 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 C5orf60A6NFR6 353 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 A6NNZ2 444 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 RNF103O00237 685 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 TRAFD1O14545 582 aaPredicted RBP10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 DDX3YO15523 660 aaKnown RBP10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 LZTS3O60299 673 aaPredicted RBP10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 PRLRP16471 622 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 HLA-DPA1P20036 260 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 MMP12P39900 470 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 NUMBP49757 651 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 BLKP51451 505 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 FAM193AP78312 1265 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 SPEM2Q0P670 501 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 LRRC14Q15048 493 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 CCNG2Q16589 344 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 TMEM259Q4ZIN3 620 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 ARHGEF18Q6ZSZ5 1173 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 DPPA4Q7L190 304 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 ARMCX6Q7L4S7 300 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 LINC00523Q86TU6 105 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 ALYREFQ86V81 257 aaKnown RBP10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 NLRP8Q86W28 1048 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 SLC13A5Q86YT5 568 aaPredicted RBP10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 NRSN1Q8IZ57 195 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 SDR16C5Q8N3Y7 309 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 ERLEC1Q96DZ1 483 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 KLHDC7BQ96G42 594 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 RUNDC3BQ96NL0 473 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 AGAP3Q96P47 875 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 FCRL5Q96RD9 977 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 MCCC1Q96RQ3 725 aaPredicted RBP10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 MLPHQ9BV36 600 aaPredicted RBP10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 FSD1LQ9BXM9 530 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 PCDH9Q9HC56 1237 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 CAPN10Q9HC96 672 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 TM9SF3Q9HD45 589 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 PCDH12Q9NPG4 1184 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 TRIM10Q9UDY6 481 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 SERGEFQ9UGK8 458 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 DRG1Q9Y295 367 aaKnown RBP10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 PCDHGB2Q9Y5G2 931 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 ZNF292O60281 2723 aa10.33□□□□□ -0.76
TRAFD1-208ENST00000552890 EML5Q05BV3 1969 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 CTAGE9A4FU28 777 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 ANKRD66B4E2M5 251 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 H3BM21 787 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 TLR4O00206 839 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 NDC80O14777 642 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 GCATO75600 419 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 NDST3O95803 873 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 HLA-DQB2P05538 268 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 IGHV4-34P06331 123 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 ITGAVP06756 1048 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 HOXC4P09017 264 aaPredicted RBP10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 PTPN3P26045 913 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 TEAD1P28347 426 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 VIPR1P32241 457 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 FDFT1P37268 417 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 PI4KAP42356 2102 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 MARCKSL1P49006 195 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 TAS2R38P59533 333 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 CDK18Q07002 472 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 KLF1Q13351 362 aaPredicted RBP10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 PARP6Q2NL67 630 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 ZNF284Q2VY69 593 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms