RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 BRD8Q9H0E9 1235 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 MTG2Q9H4K7 406 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 LRRC19Q9H756 370 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 DTLQ9NZJ0 730 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 ERVW-1Q9UQF0 538 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 NYNRINQ9P2P1 1898 aaKnown RBP11.53□□□□□ -0.56
TMEM116-218ENST00000552839 HACD1B0YJ81 288 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 J3QKU1 62 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 WNT9AO14904 365 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 KDELR3O43731 214 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 URI1O94763 535 aaPredicted RBP11.52□□□□□ -0.57
TMEM116-218ENST00000552839 ACTN2P35609 894 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 GARSP41250 739 aaKnown RBP11.52□□□□□ -0.57
TMEM116-218ENST00000552839 TNNT3P45378 269 aaPredicted RBP11.52□□□□□ -0.57
TMEM116-218ENST00000552839 CLCN6P51797 869 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 PLK1P53350 603 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 OTUD4Q01804 1114 aaKnown RBP11.52□□□□□ -0.57
TMEM116-218ENST00000552839 CFHR1Q03591 330 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 TLE3Q04726 772 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 IL10RBQ08334 325 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 SLC20A2Q08357 652 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 ITKQ08881 620 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 GALNT2Q10471 571 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 TTC31Q49AM3 519 aaPredicted RBP11.52□□□□□ -0.57
TMEM116-218ENST00000552839 ZNF776Q68DI1 518 aaPredicted RBP11.52□□□□□ -0.57
TMEM116-218ENST00000552839 NCEH1Q6PIU2 408 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 GSTA5Q7RTV2 222 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 CCDC13Q8IYE1 715 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 OR52K2Q8NGK3 314 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 ACTL9Q8TC94 416 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 CASKIN2Q8WXE0 1202 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 TTC17Q96AE7 1141 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 RPL10LQ96L21 214 aaKnown RBP11.52□□□□□ -0.57
TMEM116-218ENST00000552839 FRMD8P1Q9BZ68 369 aaPredicted RBP11.52□□□□□ -0.57
TMEM116-218ENST00000552839 HOMER3Q9NSC5 361 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.52□□□□□ -0.57
TMEM116-218ENST00000552839 ZNF212Q9UDV6 495 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 SERGEFQ9UGK8 458 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 SUN2Q9UH99 717 aa11.52□□□□□ -0.57
TMEM116-218ENST00000552839 EDDM13A0A1B0GTR0 161 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 A0A1W2PR77 199 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 ESPNB1AK53 854 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 KRIT1O00522 736 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 CES2O00748 559 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 MTSS1O43312 755 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 BRINP1O60477 761 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 PRAMEF11O60813 436 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 RNASEH1O60930 286 aaKnown RBP11.51□□□□□ -0.57
TMEM116-218ENST00000552839 IGSF6O95976 241 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 RBP3P10745 1247 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 PECAM1P16284 738 aaPredicted RBP11.51□□□□□ -0.57
TMEM116-218ENST00000552839 GLDCP23378 1020 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 CD38P28907 300 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 CTSOP43234 321 aaPredicted RBP11.51□□□□□ -0.57
TMEM116-218ENST00000552839 MMP13P45452 471 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 STK19P49842 368 aaPredicted RBP11.51□□□□□ -0.57
TMEM116-218ENST00000552839 SERPINH1P50454 418 aaKnown RBP11.51□□□□□ -0.57
TMEM116-218ENST00000552839 RENBPP51606 427 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 CXADRP78310 365 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 RAD51Q06609 339 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 CKAP4Q07065 602 aaKnown RBP11.51□□□□□ -0.57
TMEM116-218ENST00000552839 BNIP3Q12983 259 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 NOMO1Q15155 1222 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 TAZQ16635 292 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 CFAP58Q5T655 872 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 C22orf39Q6P5X5 142 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 NYAP1Q6ZVC0 841 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 USP30Q70CQ3 517 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 ARHGAP12Q8IWW6 846 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 SPACA3Q8IXA5 215 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 SKA1Q96BD8 255 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 HDAC11Q96DB2 347 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 MYO19Q96H55 970 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 GDAP1L1Q96MZ0 367 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 ZNF599Q96NL3 588 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 QKIQ96PU8 341 aaKnown RBP eCLIP11.51□□□□□ -0.579e-7■■■■■ 39
TMEM116-218ENST00000552839 FAM118BQ9BPY3 351 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 RSPH9Q9H1X1 276 aaPredicted RBP11.51□□□□□ -0.57
TMEM116-218ENST00000552839 NEUROG2Q9H2A3 272 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 PABPC3Q9H361 631 aaKnown RBP11.51□□□□□ -0.57
TMEM116-218ENST00000552839 AASDHPPTQ9NRN7 309 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 FBXL12Q9NXK8 326 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 KLHL8Q9P2G9 620 aaPredicted RBP11.51□□□□□ -0.57
TMEM116-218ENST00000552839 SAE1Q9UBE0 346 aaPredicted RBP11.51□□□□□ -0.57
TMEM116-218ENST00000552839 SEPT3Q9UH03 358 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 INTS6Q9UL03 887 aaKnown RBP11.51□□□□□ -0.57
TMEM116-218ENST00000552839 ZNF148Q9UQR1 794 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 NCKAP1Q9Y2A7 1128 aa11.51□□□□□ -0.57
TMEM116-218ENST00000552839 FCF1Q9Y324 198 aaKnown RBP11.51□□□□□ -0.57
TMEM116-218ENST00000552839 TDRD6O60522 2096 aaKnown RBP11.5□□□□□ -0.57
TMEM116-218ENST00000552839 COL6A6A6NMZ7 2263 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 A0A1W2PP55 124 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 CFAP69A5D8W1 941 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 C10orf142B7Z368 130 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 J3KR12 359 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 MID1O15344 667 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 TMCC1O94876 653 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 CCNCP24863 283 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 EPHA8P29322 1005 aaPredicted RBP11.5□□□□□ -0.57
TMEM116-218ENST00000552839 HSPA9P38646 679 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms