RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 ACOT8O14734 319 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 UBDO15205 165 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 GPC4O75487 556 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 LTA4HP09960 611 aaKnown RBP13.12□□□□□ -0.31
CACNB3-219ENST00000551544 CD52P31358 61 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 RANBP1P43487 201 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 TSPY1Q01534 308 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 FASTKQ14296 549 aaKnown RBP13.12□□□□□ -0.31
CACNB3-219ENST00000551544 RFTN1Q14699 578 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-219ENST00000551544 LAYNQ6UX15 382 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 CCDC117Q8IWD4 279 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-219ENST00000551544 PELI3Q8N2H9 469 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 MARVELD2Q8N4S9 558 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 ANKRD49Q8WVL7 239 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 PKMYT1Q99640 499 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 SENP6Q9GZR1 1112 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-219ENST00000551544 MTF2Q9Y483 593 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-219ENST00000551544 PCDHGA7Q9Y5G6 932 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 MYLKQ15746 1914 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 J3KR12 359 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 TRIM38O00635 465 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 MGEA5O60502 916 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 RNASEH2AO75792 299 aaKnown RBP13.11□□□□□ -0.31
CACNB3-219ENST00000551544 SERPINH1P50454 418 aaKnown RBP13.11□□□□□ -0.31
CACNB3-219ENST00000551544 PFKPQ01813 784 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 RALGDSQ12967 914 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 HECTD2Q5U5R9 776 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 IL31Q6EBC2 164 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 CLEC6AQ6EIG7 209 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 CD300LGQ6UXG3 332 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 THEM5Q8N1Q8 247 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 AFAP1L2Q8N4X5 818 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 HMGCLL1Q8TB92 370 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 RSPH1Q8WYR4 309 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 DLG3Q92796 817 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 ATP6V1E2Q96A05 226 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 SEMA6AQ9H2E6 1030 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 EML4Q9HC35 981 aaKnown RBP13.11□□□□□ -0.31
CACNB3-219ENST00000551544 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-219ENST00000551544 EPS15L1Q9UBC2 864 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 MYOCOSA0A1B0GUC4 107 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 PRSS51A0A1B0GVH4 220 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 ATP6AP2A0A1C7CYW4 349 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 OR51F1A6NGY5 319 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 PSMD12O00232 456 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-219ENST00000551544 ATP6AP2O75787 350 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 SMIM18P0DKX4 95 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 RGS2P41220 211 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 ARTNQ5T4W7 220 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 IL23RQ5VWK5 629 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 IYDQ6PHW0 289 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 KDELC1Q6UW63 502 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 KIAA0408Q6ZU52 694 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 SCML4Q8N228 414 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 CATSPER1Q8NEC5 780 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 ADCY4Q8NFM4 1077 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 CALML6Q8TD86 181 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 STON2Q8WXE9 905 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 EXT2Q93063 718 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 HIC2Q96JB3 615 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 PPP1R2P1Q96PQ5 205 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 SLC25A51Q9H1U9 297 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 NOL6Q9H6R4 1146 aaKnown RBP13.11□□□□□ -0.31
CACNB3-219ENST00000551544 ALG9Q9H6U8 611 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 RAB26Q9ULW5 256 aa13.11□□□□□ -0.31
CACNB3-219ENST00000551544 CEP350Q5VT06 3117 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 GLTPD2A6NH11 291 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 GPR182O15218 404 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 SLC4A1P02730 911 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 ASLP04424 464 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 ATP6V1B1P15313 513 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 CLCN2P51788 898 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 CLCN5P51795 746 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 CDKL1Q00532 357 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 DSC2Q02487 901 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 SLC10A7Q0GE19 358 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 STX5Q13190 355 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 PIK3R6Q5UE93 754 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 PAOXQ6QHF9 649 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 NMD3Q96D46 503 aaKnown RBP13.1□□□□□ -0.31
CACNB3-219ENST00000551544 HMCESQ96FZ2 354 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 SPON1Q9HCB6 807 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 OSER1Q9NX31 292 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 ABI2Q9NYB9 513 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-219ENST00000551544 PTTG2Q9NZH5 202 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 PADI3Q9ULW8 664 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 LZTS1Q9Y250 596 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 FBP2O00757 339 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 SUPT7LO94864 414 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 CSPG5O95196 566 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 CYP11A1P05108 521 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 RBP1P09455 135 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 HSPA1AP0DMV8 641 aaKnown RBP13.1□□□□□ -0.31
CACNB3-219ENST00000551544 HSPA1BP0DMV9 641 aaKnown RBP13.1□□□□□ -0.31
CACNB3-219ENST00000551544 YWHAQP27348 245 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 THPOP40225 353 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 LEPRP48357 1165 aaKnown RBP13.1□□□□□ -0.31
CACNB3-219ENST00000551544 ARSDP51689 593 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 MLLT6P55198 1093 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-219ENST00000551544 GPR158Q5T848 1215 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms