RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 CFAP69A5D8W1 941 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 ARHGAP42A6NI28 874 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 EIF3CLB5ME19 914 aaKnown RBP23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 NTN3O00634 580 aaPredicted RBP23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 INSIG1O15503 277 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 PIGNO95427 931 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 C6P13671 934 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 CDK11BP21127 795 aaKnown RBP23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 KELP23276 732 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 SERPINA4P29622 427 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 NDST2P52849 883 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 MTM1Q13496 603 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 INPP5AQ14642 412 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 CYTH1Q15438 398 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 CLEC14AQ86T13 490 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 FBXO39Q8N4B4 442 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 PCDH19Q8TAB3 1148 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 PRR11Q96HE9 360 aaPredicted RBP23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 EXOC2Q96KP1 924 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 WDR92Q96MX6 357 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 TMEM74Q96NL1 305 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 EIF3CQ99613 913 aaKnown RBP23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 KLC2Q9H0B6 622 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 ATP13A3Q9H7F0 1226 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 PCDH12Q9NPG4 1184 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 LHX3Q9UBR4 397 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 SIK3Q9Y2K2 1263 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 COQ6Q9Y2Z9 468 aa23.26■■□□□ 1.31
SMARCD1-209ENST00000550477 K7ENP7 123 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 CACNB4O00305 520 aaPredicted RBP23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 PLD2O14939 933 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 DAPK3O43293 454 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 CSNK1DP48730 415 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 SKOR1P84550 965 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 AGERQ15109 404 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 ALG11Q2TAA5 492 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 ZSCAN23Q3MJ62 389 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 INO80CQ6PI98 192 aaPredicted RBP23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 PCSK4Q6UW60 755 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 MON1BQ7L1V2 547 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 NETO2Q8NC67 525 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 CCDC74AQ96AQ1 378 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 VOPP1Q96AW1 172 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 EPB41L5Q9HCM4 733 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 FANCLQ9NW38 375 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 PNMA8BQ9ULN7 279 aaPredicted RBP23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 SSUH2Q9Y2M2 353 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 ATP8A1Q9Y2Q0 1164 aa23.25■■□□□ 1.31
SMARCD1-209ENST00000550477 KIF26BQ2KJY2 2108 aa23.24■■□□□ 1.31
SMARCD1-209ENST00000550477 COL6A6A6NMZ7 2263 aa23.24■■□□□ 1.31
SMARCD1-209ENST00000550477 TSPAN11A1L157 253 aa23.24■■□□□ 1.31
SMARCD1-209ENST00000550477 J3QKU1 62 aa23.24■■□□□ 1.31
SMARCD1-209ENST00000550477 EPHB6O15197 1021 aa23.24■■□□□ 1.31
SMARCD1-209ENST00000550477 PALMO75781 387 aa23.24■■□□□ 1.31
SMARCD1-209ENST00000550477 LIG3P49916 1009 aa23.24■■□□□ 1.31
SMARCD1-209ENST00000550477 COPB1P53618 953 aaKnown RBP23.24■■□□□ 1.31
SMARCD1-209ENST00000550477 UBXN1Q04323 297 aa23.24■■□□□ 1.31
SMARCD1-209ENST00000550477 RAB11FIP2Q7L804 512 aa23.24■■□□□ 1.31
SMARCD1-209ENST00000550477 CCNL2Q96S94 520 aaPredicted RBP23.24■■□□□ 1.31
SMARCD1-209ENST00000550477 DGKBQ9Y6T7 804 aa23.24■■□□□ 1.31
SMARCD1-209ENST00000550477 HELZ2Q9BYK8 2649 aaKnown RBP23.24■■□□□ 1.31
SMARCD1-209ENST00000550477 PDE2AO00408 941 aaPredicted RBP23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 PRAMEF11O60813 436 aa23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 PCCBP05166 539 aa23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 RPLP0P05388 317 aaKnown RBP23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 JMJD7P0C870 316 aa23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 NFKBIAP25963 317 aa23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 INHBCP55103 352 aa23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 RPL7AP62424 266 aaKnown RBP23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 ACAD10Q6JQN1 1059 aa23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 SASS6Q6UVJ0 657 aa23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 SRLQ86TD4 932 aa23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 JAMLQ86YT9 394 aa23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 KYQ8NBH2 561 aa23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 TMEM159Q96B96 161 aa23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 CINPQ9BW66 212 aaPredicted RBP23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 LRRN3Q9H3W5 708 aa23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 OR1A2Q9Y585 309 aa23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 PCDHGA7Q9Y5G6 932 aa23.23■■□□□ 1.31
SMARCD1-209ENST00000550477 A0A1W2PNU3 283 aaPredicted RBP23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 EEF2KO00418 725 aaKnown RBP23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 ZW10O43264 779 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 ZIC2O95409 532 aaPredicted RBP23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 CELA2BP08218 269 aaPredicted RBP23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 FERP16591 822 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 TNFAIP3P21580 790 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 MMP12P39900 470 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 CCL7P80098 99 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 BCL2L1Q07817 233 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 RFTN1Q14699 578 aaPredicted RBP23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 TAF8Q7Z7C8 310 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 CAMK1DQ8IU85 385 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 OR56A4Q8NGH8 313 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 TTC9Q92623 222 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 LRRC19Q9H756 370 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 SP110Q9HB58 689 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 PARVAQ9NVD7 372 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 SEPT10Q9P0V9 454 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 AP4E1Q9UPM8 1137 aa23.22■■□□□ 1.31
SMARCD1-209ENST00000550477 UNC13CQ8NB66 2214 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms