RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 DAB1O75553 588 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 CD160O95971 181 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 ALPIP09923 528 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 CTSEP14091 401 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 MSX1P28360 303 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 CXCR3P49682 368 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 HK3P52790 923 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 ZFP36L1Q07352 338 aaKnown RBP10.62□□□□□ -0.71
VPS29-208ENST00000550267 ELOCQ15369 112 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 ALG11Q2TAA5 492 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 C4orf17Q53FE4 359 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 ZNF805Q5CZA5 627 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 EFHC2Q5JST6 749 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 ARTNQ5T4W7 220 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 TMEM214Q6NUQ4 689 aaKnown RBP10.62□□□□□ -0.71
VPS29-208ENST00000550267 OLFML1Q6UWY5 402 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 CLEC18BQ6UXF7 455 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 LRRC31Q6UY01 552 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 C11orf57Q6ZUT1 292 aaPredicted RBP10.62□□□□□ -0.71
VPS29-208ENST00000550267 RD3Q7Z3Z2 195 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 CCNJLQ8IV13 435 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 PASD1Q8IV76 773 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 RYBPQ8N488 228 aaPredicted RBP10.62□□□□□ -0.71
VPS29-208ENST00000550267 TP53I13Q8NBR0 393 aaPredicted RBP10.62□□□□□ -0.71
VPS29-208ENST00000550267 CLEC18CQ8NCF0 446 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 INTS2Q9H0H0 1204 aaKnown RBP10.62□□□□□ -0.71
VPS29-208ENST00000550267 WDCPQ9H6R7 721 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 UBE2TQ9NPD8 197 aaPredicted RBP10.62□□□□□ -0.71
VPS29-208ENST00000550267 RMND1Q9NWS8 449 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 MAN2B2Q9Y2E5 1009 aa10.62□□□□□ -0.71
VPS29-208ENST00000550267 IGLV3-10A0A075B6K4 115 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 A0A1W2PQ27 194 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 A0A1W2PQ64 194 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 A0A1W2PQC6 194 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 ILVBLA1L0T0 632 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 KRIT1O00522 736 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 AREL1O15033 823 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 SRGAP2O75044 1071 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 TM7SF2O76062 418 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 ERBB2P04626 1255 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 UGT2B4P06133 528 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 HSP90AA1P07900 732 aaKnown RBP10.61□□□□□ -0.71
VPS29-208ENST00000550267 HOXB4P17483 251 aaPredicted RBP10.61□□□□□ -0.71
VPS29-208ENST00000550267 ITIH2P19823 946 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 SULT1E1P49888 294 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 BLKP51451 505 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 POLE2P56282 527 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 KRT85P78386 507 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 SLC20A2Q08357 652 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 KCNAB2Q13303 367 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 IRF4Q15306 451 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 KLHL40Q2TBA0 621 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 BRMS1LQ5PSV4 323 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 BORAQ6PGQ7 559 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 LVRNQ6Q4G3 990 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 LINC00114Q6XXX2 140 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 TMPRSS9Q7Z410 1059 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 GKN2Q86XP6 184 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 DRC7Q8IY82 874 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 VOPP1Q96AW1 172 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 CEP63Q96MT8 703 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 KLHL32Q96NJ5 620 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 NPY6RQ99463 290 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 CMKLR1Q99788 373 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 SLC12A9Q9BXP2 914 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 ADNPQ9H2P0 1102 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 RUBCNLQ9H714 662 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 ZNF212Q9UDV6 495 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 RNF215Q9Y6U7 377 aa10.61□□□□□ -0.71
VPS29-208ENST00000550267 BECN2A8MW95 431 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 TOR1BO14657 336 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 RASGRP1O95267 797 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 BMP4P12644 408 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 ACVRL1P37023 503 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 USP8P40818 1118 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 RNASE9P60153 205 aaKnown RBP10.6□□□□□ -0.71
VPS29-208ENST00000550267 SLC6A3Q01959 620 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 GNA12Q03113 381 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 DEUP1Q05D60 604 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 C16orf72Q14CZ0 275 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 PHF19Q5T6S3 580 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 KCTD16Q68DU8 428 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 GJB7Q6PEY0 223 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 ENPP7Q6UWV6 458 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 ZNF783Q6ZMS7 281 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 LEKR1Q6ZMV7 388 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 SLC26A9Q7LBE3 791 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 TTC7BQ86TV6 843 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 SLITRK4Q8IW52 837 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 SFTPA2Q8IWL1 248 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 C1orf131Q8NDD1 294 aaKnown RBP10.6□□□□□ -0.71
VPS29-208ENST00000550267 GPR156Q8NFN8 814 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 OR6C4Q8NGE1 309 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 CXorf40AQ8TE69 158 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 ISG20Q96AZ6 181 aaKnown RBP10.6□□□□□ -0.71
VPS29-208ENST00000550267 TMEM159Q96B96 161 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 ARHGEF26Q96DR7 871 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 C1orf74Q96LT6 269 aa10.6□□□□□ -0.71
VPS29-208ENST00000550267 WRAP53Q9BUR4 548 aaKnown RBP10.6□□□□□ -0.71
VPS29-208ENST00000550267 C1QTNF7Q9BXJ2 289 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms