RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 VAT1Q99536 393 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 FERMT1Q9BQL6 677 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 SLC17A9Q9BYT1 436 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 PCDHB9Q9Y5E1 797 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.5■□□□□ 0.71
DDX54-207ENST00000550016 IGLON5A6NGN9 336 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 SLC31A1O15431 190 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 PGLSO95336 258 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 CPP00450 1065 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 RBP3P10745 1247 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 CA4P22748 312 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 SGCGQ13326 291 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 TEAD4Q15561 434 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 ZNF569Q5MCW4 686 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 NAPEPLDQ6IQ20 393 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 DARS2Q6PI48 645 aaKnown RBP19.49■□□□□ 0.71
DDX54-207ENST00000550016 CDKL3Q8IVW4 592 aaPredicted RBP19.49■□□□□ 0.71
DDX54-207ENST00000550016 CXorf40AQ8TE69 158 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 IMP4Q96G21 291 aaKnown RBP19.49■□□□□ 0.71
DDX54-207ENST00000550016 FAM118BQ9BPY3 351 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 C1QTNF2Q9BXJ5 285 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 SLC25A51Q9H1U9 297 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 GLOD4Q9HC38 313 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 PYCARDQ9ULZ3 195 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 PHTF1Q9UMS5 762 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 JRKLQ9Y4A0 524 aa19.49■□□□□ 0.71
DDX54-207ENST00000550016 TCRBV7S2A1N4TA0A589 114 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 PRAMEF26H0Y7S4 382 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 MMP20O60882 483 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 ZNF189O75820 626 aaPredicted RBP19.48■□□□□ 0.71
DDX54-207ENST00000550016 MMP2P08253 660 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 RBL1P28749 1068 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 MMP12P39900 470 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 CD86P42081 329 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 CSNK1EP49674 416 aaKnown RBP19.48■□□□□ 0.71
DDX54-207ENST00000550016 FAM193AP78312 1265 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 SKOR1P84550 965 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 LMNB2Q03252 620 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 AASDHQ4L235 1098 aaPredicted RBP19.48■□□□□ 0.71
DDX54-207ENST00000550016 FAM182AQ5T1J6 154 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 SLC13A5Q86YT5 568 aaPredicted RBP19.48■□□□□ 0.71
DDX54-207ENST00000550016 ASB12Q8WXK4 309 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 SLC6A18Q96N87 628 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 C10orf88Q9H8K7 445 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 AASDHPPTQ9NRN7 309 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 TRHDEQ9UKU6 1024 aa19.48■□□□□ 0.71
DDX54-207ENST00000550016 LNP1A1A4G5 178 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 KIF5CO60282 957 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 FZD6O60353 706 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 PAK4O96013 591 aaPredicted RBP19.47■□□□□ 0.71
DDX54-207ENST00000550016 PRKCGP05129 697 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 SYPP08247 313 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 PDHA1P08559 390 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 PRLRP16471 622 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 NFKBIAP25963 317 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 MSNP26038 577 aaKnown RBP19.47■□□□□ 0.71
DDX54-207ENST00000550016 CD38P28907 300 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 AKT2P31751 481 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 GRIA4P48058 902 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 FGL2Q14314 439 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 SLC14A2Q15849 920 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 PID1Q7Z2X4 250 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 NDUFAF2Q8N183 169 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 ZNF567Q8N184 647 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 PIH1D2Q8WWB5 315 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 RBM15Q96T37 977 aaKnown RBP eCLIP19.47■□□□□ 0.71
DDX54-207ENST00000550016 WRAP53Q9BUR4 548 aaKnown RBP19.47■□□□□ 0.71
DDX54-207ENST00000550016 ZDHHC5Q9C0B5 715 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 KLHL8Q9P2G9 620 aaPredicted RBP19.47■□□□□ 0.71
DDX54-207ENST00000550016 CHKBQ9Y259 395 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 R3HDM2Q9Y2K5 976 aaKnown RBP19.47■□□□□ 0.71
DDX54-207ENST00000550016 PPIL1Q9Y3C6 166 aa19.47■□□□□ 0.71
DDX54-207ENST00000550016 CFAP69A5D8W1 941 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 ARHGAP33O14559 1287 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 WNT9AO14904 365 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 VILLO15195 856 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 TM7SF2O76062 418 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 STK10O94804 968 aaKnown RBP19.46■□□□□ 0.71
DDX54-207ENST00000550016 ENGP17813 658 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 HNRNPA2B1P22626 353 aaKnown RBP19.46■□□□□ 0.71
DDX54-207ENST00000550016 CD68P34810 354 aaPredicted RBP19.46■□□□□ 0.71
DDX54-207ENST00000550016 RPL26P61254 145 aaKnown RBP19.46■□□□□ 0.71
DDX54-207ENST00000550016 ARHGAP8P85298 464 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 SEMG2Q02383 582 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 STAT4Q14765 748 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 DPPA4Q7L190 304 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 ADAT2Q7Z6V5 191 aaKnown RBP19.46■□□□□ 0.71
DDX54-207ENST00000550016 SLC35F6Q8N357 371 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 MFSD2AQ8NA29 543 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 SKA1Q96BD8 255 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 TADA1Q96BN2 335 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 SCRN2Q96FV2 425 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 LENG8Q96PV6 779 aaPredicted RBP19.46■□□□□ 0.71
DDX54-207ENST00000550016 TDRD1Q9BXT4 1180 aaKnown RBP19.46■□□□□ 0.71
DDX54-207ENST00000550016 FRMD8P1Q9BZ68 369 aaPredicted RBP19.46■□□□□ 0.71
DDX54-207ENST00000550016 USP29Q9HBJ7 922 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 PCDH9Q9HC56 1237 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 FSCN3Q9NQT6 498 aa19.46■□□□□ 0.71
DDX54-207ENST00000550016 RPL26L1Q9UNX3 145 aaKnown RBP19.46■□□□□ 0.71
DDX54-207ENST00000550016 TDRD6O60522 2096 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms