RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 SIN3BO75182 1162 aa15.08■□□□□ 0.01
CUX1-214ENST00000550008 IGSF6O95976 241 aa15.08■□□□□ 0.01
CUX1-214ENST00000550008 KCNE1P15382 129 aa15.08■□□□□ 0.01
CUX1-214ENST00000550008 MC4RP32245 332 aa15.08■□□□□ 0.01
CUX1-214ENST00000550008 GATMP50440 423 aa15.08■□□□□ 0.01
CUX1-214ENST00000550008 PFKPQ01813 784 aa15.08■□□□□ 0.01
CUX1-214ENST00000550008 FIG4Q92562 907 aa15.08■□□□□ 0.01
CUX1-214ENST00000550008 JADE3Q92613 823 aa15.08■□□□□ 0.01
CUX1-214ENST00000550008 ZNF184Q99676 751 aaPredicted RBP15.08■□□□□ 0.01
CUX1-214ENST00000550008 ARL15Q9NXU5 204 aa15.08■□□□□ 0.01
CUX1-214ENST00000550008 ZNF180Q9UJW8 692 aa15.08■□□□□ 0.01
CUX1-214ENST00000550008 LRCH1Q9Y2L9 728 aa15.08■□□□□ 0.01
CUX1-214ENST00000550008 DNAJC25-GNG10A0A024R161 153 aa15.08■□□□□ 0
CUX1-214ENST00000550008 MATN3O15232 486 aa15.08■□□□□ 0
CUX1-214ENST00000550008 CLDN10P78369 228 aa15.08■□□□□ 0
CUX1-214ENST00000550008 ZBTB17Q13105 803 aa15.08■□□□□ 0
CUX1-214ENST00000550008 SPDYE7PQ495Y7 208 aa15.08■□□□□ 0
CUX1-214ENST00000550008 AASDHQ4L235 1098 aaPredicted RBP15.08■□□□□ 0
CUX1-214ENST00000550008 HECTD2Q5U5R9 776 aa15.08■□□□□ 0
CUX1-214ENST00000550008 GK5Q6ZS86 529 aa15.08■□□□□ 0
CUX1-214ENST00000550008 CAND1Q86VP6 1230 aaKnown RBP15.08■□□□□ 0
CUX1-214ENST00000550008 ZNF280BQ86YH2 543 aa15.08■□□□□ 0
CUX1-214ENST00000550008 MOCOSQ96EN8 888 aa15.08■□□□□ 0
CUX1-214ENST00000550008 FAXDC2Q96IV6 333 aa15.08■□□□□ 0
CUX1-214ENST00000550008 SLC9A7Q96T83 725 aa15.08■□□□□ 0
CUX1-214ENST00000550008 NPY6RQ99463 290 aa15.08■□□□□ 0
CUX1-214ENST00000550008 CXCL16Q9H2A7 254 aa15.08■□□□□ 0
CUX1-214ENST00000550008 GDAP2Q9NXN4 497 aa15.08■□□□□ 0
CUX1-214ENST00000550008 TAS2R1Q9NYW7 299 aa15.08■□□□□ 0
CUX1-214ENST00000550008 SLC2A6Q9UGQ3 507 aa15.08■□□□□ 0
CUX1-214ENST00000550008 GNG14A0A1W2PPG7 69 aa15.08■□□□□ 0
CUX1-214ENST00000550008 ZNF682O95780 498 aa15.08■□□□□ 0
CUX1-214ENST00000550008 LPOP22079 712 aaPredicted RBP15.08■□□□□ 0
CUX1-214ENST00000550008 CCNCP24863 283 aa15.08■□□□□ 0
CUX1-214ENST00000550008 KLF10Q13118 480 aa15.08■□□□□ 0
CUX1-214ENST00000550008 TCEAL1Q15170 157 aa15.08■□□□□ 0
CUX1-214ENST00000550008 PREPLQ4J6C6 727 aaPredicted RBP15.08■□□□□ 0
CUX1-214ENST00000550008 RALGPS1Q5JS13 557 aa15.08■□□□□ 0
CUX1-214ENST00000550008 TMEM198Q66K66 360 aa15.08■□□□□ 0
CUX1-214ENST00000550008 SLC9A4Q6AI14 798 aa15.08■□□□□ 0
CUX1-214ENST00000550008 DHFR2Q86XF0 187 aa15.08■□□□□ 0
CUX1-214ENST00000550008 RTL3Q8N8U3 475 aaKnown RBP15.08■□□□□ 0
CUX1-214ENST00000550008 OR56A4Q8NGH8 313 aa15.08■□□□□ 0
CUX1-214ENST00000550008 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.08■□□□□ 08e-7■■■□□ 18
CUX1-214ENST00000550008 ADAMTS10Q9H324 1103 aa15.08■□□□□ 0
CUX1-214ENST00000550008 CYLDQ9NQC7 956 aa15.08■□□□□ 0
CUX1-214ENST00000550008 EGFL7Q9UHF1 273 aa15.08■□□□□ 0
CUX1-214ENST00000550008 N4BP2Q86UW6 1770 aaPredicted RBP15.08■□□□□ 0
CUX1-214ENST00000550008 ARHGAP10A1A4S6 786 aa15.08■□□□□ 0
CUX1-214ENST00000550008 ZNF839A8K0R7 811 aa15.08■□□□□ 0
CUX1-214ENST00000550008 J3KR12 359 aa15.08■□□□□ 0
CUX1-214ENST00000550008 RAD51BO15315 384 aa15.08■□□□□ 0
CUX1-214ENST00000550008 TCEA3O75764 348 aa15.08■□□□□ 0
CUX1-214ENST00000550008 RHOQP17081 205 aa15.08■□□□□ 0
CUX1-214ENST00000550008 KHDC1Q4VXA5 237 aaKnown RBP15.08■□□□□ 0
CUX1-214ENST00000550008 NAIF1Q69YI7 327 aaPredicted RBP15.08■□□□□ 0
CUX1-214ENST00000550008 AGMOQ6ZNB7 445 aa15.08■□□□□ 0
CUX1-214ENST00000550008 SYTL1Q8IYJ3 562 aa15.08■□□□□ 0
CUX1-214ENST00000550008 TAGAPQ8N103 731 aa15.08■□□□□ 0
CUX1-214ENST00000550008 NMD3Q96D46 503 aaKnown RBP15.08■□□□□ 0
CUX1-214ENST00000550008 SIGLEC10Q96LC7 697 aa15.08■□□□□ 0
CUX1-214ENST00000550008 LENG8Q96PV6 779 aaPredicted RBP15.08■□□□□ 0
CUX1-214ENST00000550008 DPY30Q9C005 99 aa15.08■□□□□ 0
CUX1-214ENST00000550008 CCSER2Q9H7U1 834 aa15.08■□□□□ 0
CUX1-214ENST00000550008 USP29Q9HBJ7 922 aa15.08■□□□□ 0
CUX1-214ENST00000550008 MRGBPQ9NV56 204 aa15.08■□□□□ 0
CUX1-214ENST00000550008 TCAF1Q9Y4C2 921 aa15.08■□□□□ 0
CUX1-214ENST00000550008 RGSL1A5PLK6 1076 aa15.07■□□□□ 0
CUX1-214ENST00000550008 ALBP02768 609 aa15.07■□□□□ 0
CUX1-214ENST00000550008 HLA-DQB2P05538 268 aa15.07■□□□□ 0
CUX1-214ENST00000550008 PCNAP12004 261 aa15.07■□□□□ 0
CUX1-214ENST00000550008 PSMC3P17980 439 aa15.07■□□□□ 0
CUX1-214ENST00000550008 KCNQ1P51787 676 aa15.07■□□□□ 0
CUX1-214ENST00000550008 CYP51A1Q16850 503 aa15.07■□□□□ 0
CUX1-214ENST00000550008 PPM1LQ5SGD2 360 aa15.07■□□□□ 0
CUX1-214ENST00000550008 FAM45BPQ6NSW5 357 aa15.07■□□□□ 0
CUX1-214ENST00000550008 FAM45AQ8TCE6 357 aa15.07■□□□□ 0
CUX1-214ENST00000550008 C10orf82Q8WW14 230 aa15.07■□□□□ 0
CUX1-214ENST00000550008 RPL10LQ96L21 214 aaKnown RBP15.07■□□□□ 0
CUX1-214ENST00000550008 EVLQ9UI08 416 aaPredicted RBP15.07■□□□□ 0
CUX1-214ENST00000550008 ABCB1P08183 1280 aaPredicted RBP15.07■□□□□ 0
CUX1-214ENST00000550008 GRIA3P42263 894 aa15.07■□□□□ 0
CUX1-214ENST00000550008 CRY1Q16526 586 aa15.07■□□□□ 0
CUX1-214ENST00000550008 CDHR3Q6ZTQ4 885 aa15.07■□□□□ 0
CUX1-214ENST00000550008 AMIGO2Q86SJ2 522 aa15.07■□□□□ 0
CUX1-214ENST00000550008 RBM23Q86U06 439 aaKnown RBP15.07■□□□□ 0
CUX1-214ENST00000550008 C11orf74Q86VG3 221 aa15.07■□□□□ 0
CUX1-214ENST00000550008 FAM156AQ8NDB6 213 aa15.07■□□□□ 0
CUX1-214ENST00000550008 LINGO1Q96FE5 620 aa15.07■□□□□ 0
CUX1-214ENST00000550008 KCTD14Q9BQ13 255 aaPredicted RBP15.07■□□□□ 0
CUX1-214ENST00000550008 SLC25A23Q9BV35 468 aa15.07■□□□□ 0
CUX1-214ENST00000550008 CADM1Q9BY67 442 aaKnown RBP15.07■□□□□ 0
CUX1-214ENST00000550008 ZFP37Q9Y6Q3 630 aaPredicted RBP15.07■□□□□ 0
CUX1-214ENST00000550008 ANKRD12Q6UB98 2062 aa15.07■□□□□ 0
CUX1-214ENST00000550008 AMHP03971 560 aa15.07■□□□□ 0
CUX1-214ENST00000550008 SERPINA4P29622 427 aa15.07■□□□□ 0
CUX1-214ENST00000550008 CHRNB3Q05901 458 aa15.07■□□□□ 0
CUX1-214ENST00000550008 SLC30A9Q6PML9 568 aa15.07■□□□□ 0
CUX1-214ENST00000550008 CUZD1Q86UP6 607 aa15.07■□□□□ 0
CUX1-214ENST00000550008 SMG8Q8ND04 991 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms