RNA–Protein interactions for RNA: ENST00000548390.5

LETMD1-215, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-215ENST00000548390 SOX13Q9UN79 622 aa17.51■□□□□ 0.39
LETMD1-215ENST00000548390 C5orf42Q9H799 3197 aa17.51■□□□□ 0.39
LETMD1-215ENST00000548390 ATP8B1O43520 1251 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 RNASEH1O60930 286 aaKnown RBP17.5■□□□□ 0.39
LETMD1-215ENST00000548390 LEFTY1O75610 366 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 USP1O94782 785 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 PAPSS2O95340 614 aaPredicted RBP17.5■□□□□ 0.39
LETMD1-215ENST00000548390 CRTAMO95727 393 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 UGT2B4P06133 528 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 CHRM1P11229 460 aaPredicted RBP17.5■□□□□ 0.39
LETMD1-215ENST00000548390 BMP1P13497 986 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 HLA-EP13747 358 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 TPH1P17752 444 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 TIE1P35590 1138 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 CAMK2GQ13555 558 aaPredicted RBP17.5■□□□□ 0.39
LETMD1-215ENST00000548390 CCINQ13939 588 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 FRG1Q14331 258 aaKnown RBP17.5■□□□□ 0.39
LETMD1-215ENST00000548390 GALNT3Q14435 633 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 CASP8Q14790 479 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 FASTKD3Q14CZ7 662 aaKnown RBP17.5■□□□□ 0.39
LETMD1-215ENST00000548390 KYNUQ16719 465 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 ZNF805Q5CZA5 627 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 ARSIQ5FYB1 569 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 SPANXN3Q5MJ09 141 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 EOGTQ5NDL2 527 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 CERCAMQ5T4B2 595 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 EMC10Q5UCC4 262 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 STEAP4Q687X5 459 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 PKN3Q6P5Z2 889 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 ZNF449Q6P9G9 518 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 CYS1Q717R9 158 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 ANKMY2Q8IV38 441 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 STK40Q8N2I9 435 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 AGGF1Q8N302 714 aaeCLIP17.5■□□□□ 0.39
LETMD1-215ENST00000548390 VOPP1Q96AW1 172 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 C19orf43Q9BQ61 176 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 FUT8Q9BYC5 575 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 MAGEE1Q9HCI5 957 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 PRSS16Q9NQE7 514 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 PIH1D1Q9NWS0 290 aaKnown RBP17.5■□□□□ 0.39
LETMD1-215ENST00000548390 FBXL21Q9UKT6 434 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 PPM1HQ9ULR3 514 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 PPIL1Q9Y3C6 166 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 TCAF1Q9Y4C2 921 aa17.5■□□□□ 0.39
LETMD1-215ENST00000548390 MUC22E2RYF6 1773 aaPredicted RBP17.49■□□□□ 0.39
LETMD1-215ENST00000548390 A0A087WUV0 522 aaPredicted RBP17.49■□□□□ 0.39
LETMD1-215ENST00000548390 A0A0J9YYE9 177 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 BANF1O75531 89 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 TRBC1P01850 177 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 PDHA1P08559 390 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 NUDT17P0C025 328 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 GKP32189 559 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 STX2P32856 288 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 SEC13P55735 322 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 STARD6P59095 220 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 MSLNQ13421 630 aaPredicted RBP17.49■□□□□ 0.39
LETMD1-215ENST00000548390 MTM1Q13496 603 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 POU6F1Q14863 301 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 ALS2CLQ60I27 953 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 USP45Q70EL2 814 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 TMEM135Q86UB9 458 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 MPP5Q8N3R9 675 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 ZNF366Q8N895 744 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 GRIN3AQ8TCU5 1115 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 KLHL32Q96NJ5 620 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 LYSMD1Q96S90 227 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 ACOX2Q99424 681 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 WDR83Q9BRX9 315 aaKnown RBP17.49■□□□□ 0.39
LETMD1-215ENST00000548390 LRRC4CQ9HCJ2 640 aa17.49■□□□□ 0.39
LETMD1-215ENST00000548390 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.49■□□□□ 0.393e-9■■□□□ 11.5
LETMD1-215ENST00000548390 CAPN8A6NHC0 703 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 SHISA7A6NL88 538 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 C2orf81A6NN90 581 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 ABCB7O75027 752 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 ACSL3O95573 720 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 CTSLP07711 333 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 PAMP19021 973 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 ITGB7P26010 798 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 EIF3BP55884 814 aaKnown RBP17.48■□□□□ 0.39
LETMD1-215ENST00000548390 CCDC15Q0P6D6 951 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 TAF1AQ15573 450 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-215ENST00000548390 UAP1Q16222 522 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-215ENST00000548390 C2orf27AQ580R0 203 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 HP1BP3Q5SSJ5 553 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-215ENST00000548390 UNC5AQ6ZN44 842 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 C3orf62Q6ZUJ4 267 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 CROCCP2Q86T23 111 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 IGDCC3Q8IVU1 814 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 IL17RCQ8NAC3 791 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 OR2T3Q8NH03 318 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 GSDMBQ8TAX9 411 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 PIP4K2CQ8TBX8 421 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 BLOC1S5Q8TDH9 187 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 SCRN2Q96FV2 425 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 CFAP36Q96G28 342 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 MCCC1Q96RQ3 725 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-215ENST00000548390 FAM129BQ96TA1 746 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 CCDC77Q9BR77 488 aa17.48■□□□□ 0.39
LETMD1-215ENST00000548390 RSPH9Q9H1X1 276 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-215ENST00000548390 ACBD3Q9H3P7 528 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms