RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 TMCC1O94876 653 aa21.05■□□□□ 0.96
RITA1-201ENST00000548278 PIRTP0C851 137 aa21.05■□□□□ 0.96
RITA1-201ENST00000548278 TARSP26639 723 aaKnown RBP21.05■□□□□ 0.96
RITA1-201ENST00000548278 AQP5P55064 265 aa21.05■□□□□ 0.96
RITA1-201ENST00000548278 ABCE1P61221 599 aaKnown RBP21.05■□□□□ 0.96
RITA1-201ENST00000548278 KCNJ2P63252 427 aa21.05■□□□□ 0.96
RITA1-201ENST00000548278 PTPRCAPQ14761 206 aa21.05■□□□□ 0.96
RITA1-201ENST00000548278 TBC1D1Q86TI0 1168 aaPredicted RBP21.05■□□□□ 0.96
RITA1-201ENST00000548278 LMNTD2Q8IXW0 634 aa21.05■□□□□ 0.96
RITA1-201ENST00000548278 PNPLA1Q8N8W4 532 aa21.05■□□□□ 0.96
RITA1-201ENST00000548278 RDH11Q8TC12 318 aa21.05■□□□□ 0.96
RITA1-201ENST00000548278 WFDC5Q8TCV5 224 aa21.05■□□□□ 0.96
RITA1-201ENST00000548278 TSNARE1Q96NA8 513 aa21.05■□□□□ 0.96
RITA1-201ENST00000548278 TDRD1Q9BXT4 1180 aaKnown RBP21.05■□□□□ 0.96
RITA1-201ENST00000548278 SAR1AQ9NR31 198 aa21.05■□□□□ 0.96
RITA1-201ENST00000548278 ARHGEF3Q9NR81 526 aa21.05■□□□□ 0.96
RITA1-201ENST00000548278 MARCH4Q9P2E8 410 aaPredicted RBP21.05■□□□□ 0.96
RITA1-201ENST00000548278 CPSF2Q9P2I0 782 aaKnown RBP21.05■□□□□ 0.96
RITA1-201ENST00000548278 DNAJC16Q9Y2G8 782 aa21.05■□□□□ 0.96
RITA1-201ENST00000548278 OR51F1A6NGY5 319 aa21.04■□□□□ 0.96
RITA1-201ENST00000548278 S1PR4O95977 384 aa21.04■□□□□ 0.96
RITA1-201ENST00000548278 CKMP06732 381 aa21.04■□□□□ 0.96
RITA1-201ENST00000548278 CLCN5P51795 746 aa21.04■□□□□ 0.96
RITA1-201ENST00000548278 ERVFC1P60507 584 aa21.04■□□□□ 0.96
RITA1-201ENST00000548278 DLG1Q12959 904 aa21.04■□□□□ 0.96
RITA1-201ENST00000548278 ZYG11AQ6WRX3 759 aa21.04■□□□□ 0.96
RITA1-201ENST00000548278 NAPRTQ6XQN6 538 aa21.04■□□□□ 0.96
RITA1-201ENST00000548278 HTR3DQ70Z44 454 aa21.04■□□□□ 0.96
RITA1-201ENST00000548278 PIWIL2Q8TC59 973 aaKnown RBP21.04■□□□□ 0.96
RITA1-201ENST00000548278 BADQ92934 168 aa21.04■□□□□ 0.96
RITA1-201ENST00000548278 ALG14Q96F25 216 aa21.04■□□□□ 0.96
RITA1-201ENST00000548278 SUDS3Q9H7L9 328 aaPredicted RBP21.04■□□□□ 0.96
RITA1-201ENST00000548278 OXSMQ9NWU1 459 aa21.04■□□□□ 0.96
RITA1-201ENST00000548278 MID2Q9UJV3 735 aa21.04■□□□□ 0.96
RITA1-201ENST00000548278 TYW5A2RUC4 315 aaKnown RBP21.03■□□□□ 0.96
RITA1-201ENST00000548278 TK2O00142 265 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 BUD23O43709 281 aaKnown RBP21.03■□□□□ 0.96
RITA1-201ENST00000548278 NQO1P15559 274 aaKnown RBP21.03■□□□□ 0.96
RITA1-201ENST00000548278 ZBTB16Q05516 673 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 NSUN2Q08J23 767 aaKnown RBP eCLIP21.03■□□□□ 0.96
RITA1-201ENST00000548278 TTC31Q49AM3 519 aaPredicted RBP21.03■□□□□ 0.96
RITA1-201ENST00000548278 LDB1Q86U70 411 aaPredicted RBP21.03■□□□□ 0.96
RITA1-201ENST00000548278 KIF2BQ8N4N8 673 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 STYXQ8WUJ0 223 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 PRR11Q96HE9 360 aaPredicted RBP21.03■□□□□ 0.96
RITA1-201ENST00000548278 NDNQ99608 321 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 OLFM1Q99784 485 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 SIKE1Q9BRV8 207 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 DNMT3BQ9UBC3 853 aaKnown RBP21.03■□□□□ 0.96
RITA1-201ENST00000548278 VPS28Q9UK41 221 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 LSM7Q9UK45 103 aaKnown RBP21.03■□□□□ 0.96
RITA1-201ENST00000548278 SPO11Q9Y5K1 396 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 IRAK3Q9Y616 596 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 ANKRD36A6QL64 1941 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 A0A087X1B8 175 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 TARM1B6A8C7 271 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 TRIM13O60858 407 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 RPP40O75818 363 aaKnown RBP21.03■□□□□ 0.96
RITA1-201ENST00000548278 KLHL2O95198 593 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 CBX6O95503 412 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 CSKP41240 450 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 GLRBP48167 497 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 INO80DQ53TQ3 878 aaPredicted RBP21.03■□□□□ 0.96
RITA1-201ENST00000548278 FSTL5Q8N475 847 aaPredicted RBP21.03■□□□□ 0.96
RITA1-201ENST00000548278 OR13C4Q8NGS5 318 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 GPR150Q8NGU9 434 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 SP7Q8TDD2 431 aaPredicted RBP21.03■□□□□ 0.96
RITA1-201ENST00000548278 NXNL1Q96CM4 212 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 TCF25Q9BQ70 676 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 WWP1Q9H0M0 922 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 CFAP97Q9P2B7 532 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 LHX3Q9UBR4 397 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 HAO1Q9UJM8 370 aa21.03■□□□□ 0.96
RITA1-201ENST00000548278 A0A1W2PRU2 124 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 CCDC162PA2VCL2 907 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 GOT2P00505 430 aaKnown RBP21.02■□□□□ 0.96
RITA1-201ENST00000548278 PDHA1P08559 390 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 GJA1P17302 382 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 CDC25CP30307 473 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 SLC12A2P55011 1212 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 FPGSQ05932 587 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 CDH18Q13634 790 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 TMEM240Q5SV17 173 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 LRRC8EQ6NSJ5 796 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 ALYREFQ86V81 257 aaKnown RBP21.02■□□□□ 0.96
RITA1-201ENST00000548278 TTC16Q8NEE8 873 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 PPP4R1Q8TF05 950 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 VPS51Q9UID3 782 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 RAI2Q9Y5P3 530 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 DOCK6Q96HP0 2047 aa21.02■□□□□ 0.96
RITA1-201ENST00000548278 TRAV19A0A0A6YYK7 116 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 HIDE1A8MVS5 230 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 H2AFYO75367 372 aaKnown RBP21.01■□□□□ 0.95
RITA1-201ENST00000548278 ZNF140P52738 457 aaPredicted RBP21.01■□□□□ 0.95
RITA1-201ENST00000548278 LBX1P52954 281 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 CYB5D1Q6P9G0 228 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 WDR75Q8IWA0 830 aaKnown RBP21.01■□□□□ 0.95
RITA1-201ENST00000548278 BBS7Q8IWZ6 715 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 ELMOD1Q8N336 334 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 DNAJC5GQ8N7S2 189 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms