RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SPACA7Q96KW9 195 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 DUSP15Q9H1R2 295 aaPredicted RBP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 GLOD4Q9HC38 313 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 SAYSD1Q9NPB0 183 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 USP36Q9P275 1121 aaKnown RBP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 A0A1W2PP55 124 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 SLC8A1P32418 973 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 RHOAP61586 193 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 SARNPP82979 210 aaKnown RBP17.55■□□□□ 0.4
HDAC7-227ENST00000548080 SLC20A2Q08357 652 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 CBLBQ13191 982 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 CYTH1Q15438 398 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 PLK5Q496M5 336 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 FNBP1LQ5T0N5 605 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 TMCO4Q5TGY1 634 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 AADATQ8N5Z0 425 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 PCDH20Q8N6Y1 951 aaKnown RBP17.55■□□□□ 0.4
HDAC7-227ENST00000548080 PIP4K2CQ8TBX8 421 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 TOE1Q96GM8 510 aaKnown RBP17.55■□□□□ 0.4
HDAC7-227ENST00000548080 PABPC3Q9H361 631 aaKnown RBP17.55■□□□□ 0.4
HDAC7-227ENST00000548080 ACBD3Q9H3P7 528 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 SEMA4AQ9H3S1 761 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 ZDHHC6Q9H6R6 413 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 FBRSQ9HAH7 460 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 ITM2CQ9NQX7 267 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 LHX3Q9UBR4 397 aa17.55■□□□□ 0.4
HDAC7-227ENST00000548080 GON4LQ3T8J9 2241 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 ERI2A8K979 691 aaKnown RBP17.54■□□□□ 0.4
HDAC7-227ENST00000548080 ALOX15BO15296 676 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 PSMD3O43242 534 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 LMNAP02545 664 aaKnown RBP17.54■□□□□ 0.4
HDAC7-227ENST00000548080 HLA-DQB2P05538 268 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 CNR2P34972 360 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 MAGEA4P43358 317 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 MMP13P45452 471 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 RECQLP46063 649 aaPredicted RBP17.54■□□□□ 0.4
HDAC7-227ENST00000548080 CCNHP51946 323 aaPredicted RBP17.54■□□□□ 0.4
HDAC7-227ENST00000548080 GEMIN4P57678 1058 aaKnown RBP17.54■□□□□ 0.4
HDAC7-227ENST00000548080 RPL6Q02878 288 aaKnown RBP17.54■□□□□ 0.4
HDAC7-227ENST00000548080 SLC10A7Q0GE19 358 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 PDIA2Q13087 525 aaKnown RBP17.54■□□□□ 0.4
HDAC7-227ENST00000548080 LBRQ14739 615 aaKnown RBP17.54■□□□□ 0.4
HDAC7-227ENST00000548080 CARD16Q5EG05 197 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 IQCKQ8N0W5 287 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 PDCD7Q8N8D1 485 aaKnown RBP17.54■□□□□ 0.4
HDAC7-227ENST00000548080 FAM122AQ96E09 287 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 ZNF419Q96HQ0 510 aaPredicted RBP17.54■□□□□ 0.4
HDAC7-227ENST00000548080 SERPINB12Q96P63 405 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 PPP1R2P1Q96PQ5 205 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 FCRL5Q96RD9 977 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 GORASP1Q9BQQ3 440 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 CEP44Q9C0F1 390 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 CDC42EP4Q9H3Q1 356 aaKnown RBP17.54■□□□□ 0.4
HDAC7-227ENST00000548080 XAB2Q9HCS7 855 aaKnown RBP17.54■□□□□ 0.4
HDAC7-227ENST00000548080 FBXL12Q9NXK8 326 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 HECAQ9UBI9 543 aaPredicted RBP17.54■□□□□ 0.4
HDAC7-227ENST00000548080 RAB23Q9ULC3 237 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 WASF2Q9Y6W5 498 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 FRYLO94915 3013 aa17.54■□□□□ 0.4
HDAC7-227ENST00000548080 GOLGA6CA6NDK9 693 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 GOLGA6BA6NDN3 693 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 PRR23AA6NEV1 266 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 E7ESA3 106 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 KPNA3O00505 521 aaPredicted RBP17.53■□□□□ 0.4
HDAC7-227ENST00000548080 INSIG1O15503 277 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 ZNF217O75362 1048 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 GJB3O75712 270 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 RNASEH2AO75792 299 aaKnown RBP17.53■□□□□ 0.4
HDAC7-227ENST00000548080 GOLGA6DP0CG33 693 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 ACSL1P33121 698 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 RGRP47804 291 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 CCDC6Q16204 474 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 ARSIQ5FYB1 569 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 MTERF4Q7Z6M4 381 aaKnown RBP17.53■□□□□ 0.4
HDAC7-227ENST00000548080 CAND1Q86VP6 1230 aaKnown RBP17.53■□□□□ 0.4
HDAC7-227ENST00000548080 KLHDC8BQ8IXV7 354 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 HDDC3Q8N4P3 179 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 ARRDC3Q96B67 414 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 GPR174Q9BXC1 333 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 EPB41L4BQ9H329 900 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 NT5MQ9NPB1 228 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 GOLGA6AQ9NYA3 693 aa17.53■□□□□ 0.4
HDAC7-227ENST00000548080 EVLQ9UI08 416 aaPredicted RBP17.53■□□□□ 0.4
HDAC7-227ENST00000548080 TTC24A2A3L6 582 aaPredicted RBP17.52■□□□□ 0.4
HDAC7-227ENST00000548080 PROB1E7EW31 1015 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 RIPK2O43353 540 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 LEFTY1O75610 366 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 AP2A1O95782 977 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 TTC4O95801 387 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 CD6P30203 668 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 DRD3P35462 400 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 DHPSP49366 369 aaPredicted RBP17.52■□□□□ 0.4
HDAC7-227ENST00000548080 RFTN1Q14699 578 aaPredicted RBP17.52■□□□□ 0.4
HDAC7-227ENST00000548080 KYNUQ16719 465 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 BBS9Q3SYG4 887 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 TTC31Q49AM3 519 aaPredicted RBP17.52■□□□□ 0.4
HDAC7-227ENST00000548080 MSS51Q4VC12 460 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 DNAJC21Q5F1R6 531 aaKnown RBP17.52■□□□□ 0.4
HDAC7-227ENST00000548080 PMS2CLQ68D20 193 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 KCTD11Q693B1 232 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms