RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 C5orf60A6NFR6 353 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 USP27XA6NNY8 438 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 PRAMEF26H0Y7S4 382 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 CES2O00748 559 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 NEMP1O14524 444 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 CPP00450 1065 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 EPOP01588 193 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 CD86P42081 329 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 OVGP1Q12889 678 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 CCNG2Q16589 344 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 TRIM61Q5EBN2 209 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 DRICH1Q6PGQ1 229 aaPredicted RBP14.56□□□□□ -0.08
DDX54-203ENST00000546869 PRR23CQ6ZRP0 262 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 B4GALNT4Q76KP1 1039 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 DPPA4Q7L190 304 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 PID1Q7Z2X4 250 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 IQCHQ86VS3 1027 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 SLC35F6Q8N357 371 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 TMEM145Q8NBT3 493 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 CXorf40AQ8TE69 158 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 LYSMD1Q96S90 227 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 HINFPQ9BQA5 517 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 NUSAP1Q9BXS6 441 aaKnown RBP14.56□□□□□ -0.08
DDX54-203ENST00000546869 ZDHHC5Q9C0B5 715 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 TM9SF3Q9HD45 589 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 KCTD5Q9NXV2 234 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 R3HDM2Q9Y2K5 976 aaKnown RBP14.56□□□□□ -0.08
DDX54-203ENST00000546869 TNRC6BQ9UPQ9 1833 aaKnown RBP14.56□□□□□ -0.08
DDX54-203ENST00000546869 NUMA1Q14980 2115 aa14.56□□□□□ -0.08
DDX54-203ENST00000546869 RIF1Q5UIP0 2472 aaKnown RBP14.55□□□□□ -0.08
DDX54-203ENST00000546869 A0A1W2PR77 199 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 ENC1O14682 589 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 VILLO15195 856 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 GCATO75600 419 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 STK10O94804 968 aaKnown RBP14.55□□□□□ -0.08
DDX54-203ENST00000546869 PDHA1P08559 390 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 CYP2A6P11509 494 aaPredicted RBP14.55□□□□□ -0.08
DDX54-203ENST00000546869 PRLRP16471 622 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 HNRNPA2B1P22626 353 aaKnown RBP14.55□□□□□ -0.08
DDX54-203ENST00000546869 CD38P28907 300 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 IRX4P78413 519 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 SGCGQ13326 291 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 SIX1Q15475 284 aaPredicted RBP14.55□□□□□ -0.08
DDX54-203ENST00000546869 TEAD4Q15561 434 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 OASLQ15646 514 aaKnown RBP14.55□□□□□ -0.08
DDX54-203ENST00000546869 ANKRD20A2Q5SQ80 823 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 ANKRD20A1Q5TYW2 823 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 ANKRD20A3Q5VUR7 823 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 SEL1L3Q68CR1 1132 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 ITPRIPL1Q6GPH6 555 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 ZCCHC9Q8N567 271 aaKnown RBP14.55□□□□□ -0.08
DDX54-203ENST00000546869 MFSD2AQ8NA29 543 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 DENND6BQ8NEG7 585 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 SNX19Q92543 992 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 SKA1Q96BD8 255 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 RTP4Q96DX8 246 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 SERAC1Q96JX3 654 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 PPP1R2P1Q96PQ5 205 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 TRIB3Q96RU7 358 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 ADGRE3Q9BY15 652 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 CEP41Q9BYV8 373 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 MIR1-1HGQ9H1L0 117 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 PCDH9Q9HC56 1237 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 HOMER3Q9NSC5 361 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 KLHL8Q9P2G9 620 aaPredicted RBP14.55□□□□□ -0.08
DDX54-203ENST00000546869 FAM153AQ9UHL3 310 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 GGT7Q9UJ14 662 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 DNPEPQ9ULA0 475 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 DRG1Q9Y295 367 aaKnown RBP14.55□□□□□ -0.08
DDX54-203ENST00000546869 TTLL3Q9Y4R7 772 aa14.55□□□□□ -0.08
DDX54-203ENST00000546869 ATXN2Q99700 1313 aaKnown RBP14.55□□□□□ -0.08
DDX54-203ENST00000546869 EP300Q09472 2414 aaPredicted RBP14.54□□□□□ -0.08
DDX54-203ENST00000546869 VPS13AQ96RL7 3174 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 A0A0J9YYE9 177 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 LOC285095A0A1B0GVY8 99 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 IGLON5A6NGN9 336 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 PATE3B3GLJ2 98 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 ANKRD66B4E2M5 251 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 PSMD11O00231 422 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 ARHGAP33O14559 1287 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 TOR1BO14657 336 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 KCNN4O15554 427 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 LIASO43766 372 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 CEP104O60308 925 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 MAGEC1O60732 1142 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 MMP20O60882 483 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 OPHN1O60890 802 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 TM7SF2O76062 418 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 PAK4O96013 591 aaPredicted RBP14.54□□□□□ -0.08
DDX54-203ENST00000546869 TRBC1P01850 177 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 FGGP02679 453 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 ATP1A1P05023 1023 aaKnown RBP14.54□□□□□ -0.08
DDX54-203ENST00000546869 SYPP08247 313 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 ITIH2P19823 946 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 MAT2AP31153 395 aaKnown RBP14.54□□□□□ -0.08
DDX54-203ENST00000546869 AKT2P31751 481 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 FAM193AP78312 1265 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 ARHGAP8P85298 464 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 LMNB2Q03252 620 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 CDK18Q07002 472 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms