RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 TXNP10599 105 aaKnown RBP12.86□□□□□ -0.35
PTCH1-212ENST00000546744 OGNP20774 298 aaKnown RBP12.86□□□□□ -0.35
PTCH1-212ENST00000546744 DNAJB1P25685 340 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 FOXN2P32314 431 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 SLC11A2P49281 568 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 RPS7P62081 194 aaKnown RBP12.86□□□□□ -0.35
PTCH1-212ENST00000546744 PLIN5Q00G26 463 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 ZACNQ401N2 412 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 GPSM1Q86YR5 675 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 RIOX2Q8IUF8 465 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 LENG8Q96PV6 779 aaPredicted RBP12.86□□□□□ -0.35
PTCH1-212ENST00000546744 EMILIN2Q9BXX0 1053 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 AGO4Q9HCK5 861 aaKnown RBP12.86□□□□□ -0.35
PTCH1-212ENST00000546744 XPR1Q9UBH6 696 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 DSEQ9UL01 958 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 TRAF6Q9Y4K3 522 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 CENPBD1B2RD01 187 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 NPHS1O60500 1241 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 SLC22A3O75751 556 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 SEMA3DO95025 777 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 IFNA7P01567 189 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 UGT2B4P06133 528 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 ERVK-10P10266 1014 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 AMPD1P23109 780 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 TM4SF1P30408 202 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 SLC16A1P53985 500 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 MERTKQ12866 999 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 ALDH16A1Q8IZ83 802 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 TTLL6Q8N841 843 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 SUCOQ9UBS9 1254 aaKnown RBP12.86□□□□□ -0.35
PTCH1-212ENST00000546744 PMM2O15305 246 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 AIREO43918 545 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 CLPXO76031 633 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 CPB1P15086 417 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 CYP2A7P20853 494 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 GPC1P35052 558 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 LSM3P62310 102 aaKnown RBP12.85□□□□□ -0.35
PTCH1-212ENST00000546744 C4orf32Q8N8J7 132 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 ZSWIM2Q8NEG5 633 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 REXO5Q96IC2 774 aaKnown RBP12.85□□□□□ -0.35
PTCH1-212ENST00000546744 RDH12Q96NR8 316 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 SH2D3AQ9BRG2 576 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 GPRC5CQ9NQ84 441 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 OPTCQ9UBM4 332 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 ZNF222Q9UK12 451 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 DYRK1BQ9Y463 629 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 IRAK3Q9Y616 596 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.85□□□□□ -0.35
PTCH1-212ENST00000546744 GNG14A0A1W2PPG7 69 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 ZNF99A8MXY4 864 aaPredicted RBP12.85□□□□□ -0.35
PTCH1-212ENST00000546744 MYL9P24844 172 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 CCR1P32246 355 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 NOS2P35228 1153 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 CDH18Q13634 790 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 PRKD1Q15139 912 aaPredicted RBP12.85□□□□□ -0.35
PTCH1-212ENST00000546744 CA9Q16790 459 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 FBXO43Q4G163 708 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 ACOT1Q86TX2 421 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 MARVELD2Q8N4S9 558 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 ZNF671Q8TAW3 534 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 DNAJB14Q8TBM8 379 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 VPS35Q96QK1 796 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 APOL2Q9BQE5 337 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 LHX5Q9H2C1 402 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 INTS10Q9NVR2 710 aaKnown RBP12.85□□□□□ -0.35
PTCH1-212ENST00000546744 A0A0J9YYE9 177 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 UBXN8O00124 270 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 CSDE1O75534 798 aaKnown RBP12.85□□□□□ -0.35
PTCH1-212ENST00000546744 C2P06681 752 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 ARP10275 920 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 ODC1P11926 461 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 MMP8P22894 467 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 IL18R1Q13478 541 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 GNA13Q14344 377 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 HKDC1Q2TB90 917 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 EFCAB12Q6NXP0 572 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 FAM131AQ6UXB0 335 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 ADAMTSL2Q86TH1 951 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 MPP5Q8N3R9 675 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 LRRC71Q8N4P6 559 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 FAM163AQ96GL9 167 aaPredicted RBP12.85□□□□□ -0.35
PTCH1-212ENST00000546744 TTYH1Q9H313 450 aaPredicted RBP12.85□□□□□ -0.35
PTCH1-212ENST00000546744 SNX6Q9UNH7 406 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 SNX8Q9Y5X2 465 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 NRAPQ86VF7 1730 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 MICAL2O94851 1124 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 ZBTB7AO95365 584 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 MAP3K6O95382 1288 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 OTCP00480 354 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 PEPDP12955 493 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 TFEBP19484 476 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 GPD2P43304 727 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 SRP54P61011 504 aaKnown RBP12.85□□□□□ -0.35
PTCH1-212ENST00000546744 HSF2Q03933 536 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 RFWD3Q6PCD5 774 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 ZYG11AQ6WRX3 759 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 ELMOD1Q8N336 334 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 PTGR2Q8N8N7 351 aaPredicted RBP12.85□□□□□ -0.35
PTCH1-212ENST00000546744 ITCHQ96J02 903 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 SLC22A4Q9H015 551 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms