RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 PIRTP0C851 137 aa19.56■□□□□ 0.72
SKP2-208ENST00000546211 SERPINA4P29622 427 aa19.56■□□□□ 0.72
SKP2-208ENST00000546211 RPL26P61254 145 aaKnown RBP19.56■□□□□ 0.72
SKP2-208ENST00000546211 THOC5Q13769 683 aaKnown RBP19.56■□□□□ 0.72
SKP2-208ENST00000546211 MYLK3Q32MK0 819 aa19.56■□□□□ 0.72
SKP2-208ENST00000546211 GRTP1Q5TC63 336 aa19.56■□□□□ 0.72
SKP2-208ENST00000546211 PARM1Q6UWI2 310 aa19.56■□□□□ 0.72
SKP2-208ENST00000546211 MTSS1LQ765P7 747 aa19.56■□□□□ 0.72
SKP2-208ENST00000546211 GLT6D1Q7Z4J2 308 aa19.56■□□□□ 0.72
SKP2-208ENST00000546211 CAMK1DQ8IU85 385 aa19.56■□□□□ 0.72
SKP2-208ENST00000546211 SMRP1Q8NCR6 262 aa19.56■□□□□ 0.72
SKP2-208ENST00000546211 TUBGCP5Q96RT8 1024 aa19.56■□□□□ 0.72
SKP2-208ENST00000546211 RPL26L1Q9UNX3 145 aaKnown RBP19.56■□□□□ 0.72
SKP2-208ENST00000546211 COLQQ9Y215 455 aaPredicted RBP19.56■□□□□ 0.72
SKP2-208ENST00000546211 MYO9BQ13459 2157 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 OTOL1A6NHN0 477 aaPredicted RBP19.55■□□□□ 0.72
SKP2-208ENST00000546211 A6NNZ2 444 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 PGLSO95336 258 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 PIGNO95427 931 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 SRPRAP08240 638 aaKnown RBP19.55■□□□□ 0.72
SKP2-208ENST00000546211 DLDP09622 509 aaKnown RBP19.55■□□□□ 0.72
SKP2-208ENST00000546211 CREB1P16220 341 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 RECQLP46063 649 aaPredicted RBP19.55■□□□□ 0.72
SKP2-208ENST00000546211 GRIA4P48058 902 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 SLC6A11P48066 632 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 ARCN1P48444 511 aaKnown RBP19.55■□□□□ 0.72
SKP2-208ENST00000546211 GRM3Q14832 879 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 QPCTQ16769 361 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 GAB4Q2WGN9 574 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 TUBB8Q3ZCM7 444 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 STRA8Q7Z7C7 330 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 C4orf33Q8N1A6 199 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 CYB5D2Q8WUJ1 264 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 FGF14Q92915 247 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 MRGPRX3Q96LB0 322 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 AGAP2Q99490 1192 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 GAS2L1Q99501 681 aaPredicted RBP19.55■□□□□ 0.72
SKP2-208ENST00000546211 FAM167BQ9BTA0 163 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 CAPS2Q9BXY5 557 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 HACD3Q9P035 362 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 RIMKLBQ9ULI2 386 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 PSAT1Q9Y617 370 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 ARL5AQ9Y689 179 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 MYLKQ15746 1914 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 KIF26AQ9ULI4 1882 aaPredicted RBP19.55■□□□□ 0.72
SKP2-208ENST00000546211 PDE4DIPQ5VU43 2346 aa19.55■□□□□ 0.72
SKP2-208ENST00000546211 TMEM120BA0PK00 339 aa19.54■□□□□ 0.72
SKP2-208ENST00000546211 C2orf81A6NN90 581 aa19.54■□□□□ 0.72
SKP2-208ENST00000546211 GOLGA8TH3BQL2 631 aa19.54■□□□□ 0.72
SKP2-208ENST00000546211 HTRA2O43464 458 aaPredicted RBP19.54■□□□□ 0.72
SKP2-208ENST00000546211 POP4O95707 220 aaKnown RBP19.54■□□□□ 0.72
SKP2-208ENST00000546211 KRT4P19013 534 aa19.54■□□□□ 0.72
SKP2-208ENST00000546211 VASPP50552 380 aaPredicted RBP19.54■□□□□ 0.72
SKP2-208ENST00000546211 CCNHP51946 323 aaPredicted RBP19.54■□□□□ 0.72
SKP2-208ENST00000546211 ST8SIA6P61647 398 aa19.54■□□□□ 0.72
SKP2-208ENST00000546211 PRAMEP78395 509 aa19.54■□□□□ 0.72
SKP2-208ENST00000546211 BMPR2Q13873 1038 aa19.54■□□□□ 0.72
SKP2-208ENST00000546211 TAF1AQ15573 450 aaPredicted RBP19.54■□□□□ 0.72
SKP2-208ENST00000546211 PLPP6Q8IY26 295 aa19.54■□□□□ 0.72
SKP2-208ENST00000546211 OR13J1Q8NGT2 312 aa19.54■□□□□ 0.72
SKP2-208ENST00000546211 CALML6Q8TD86 181 aa19.54■□□□□ 0.72
SKP2-208ENST00000546211 STYXQ8WUJ0 223 aa19.54■□□□□ 0.72
SKP2-208ENST00000546211 ELOVL2Q9NXB9 296 aa19.54■□□□□ 0.72
SKP2-208ENST00000546211 CD207Q9UJ71 328 aa19.54■□□□□ 0.72
SKP2-208ENST00000546211 SMG5Q9UPR3 1016 aaKnown RBP19.54■□□□□ 0.72
SKP2-208ENST00000546211 SPO11Q9Y5K1 396 aa19.54■□□□□ 0.72
SKP2-208ENST00000546211 TRAFD1O14545 582 aaPredicted RBP19.53■□□□□ 0.72
SKP2-208ENST00000546211 SLC7A4O43246 635 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 ARNTP27540 789 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 GDI1P31150 447 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 GKP32189 559 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 SLC8A1P32418 973 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 SPRP35270 261 aaPredicted RBP19.53■□□□□ 0.72
SKP2-208ENST00000546211 MDH1P40925 334 aaKnown RBP19.53■□□□□ 0.72
SKP2-208ENST00000546211 CSE1LP55060 971 aaKnown RBP19.53■□□□□ 0.72
SKP2-208ENST00000546211 PDE1BQ01064 536 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 PPARDQ03181 441 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 KDSRQ06136 332 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 GABPB1Q06547 395 aaPredicted RBP19.53■□□□□ 0.72
SKP2-208ENST00000546211 DNAJC3Q13217 504 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 EIF4HQ15056 248 aaKnown RBP19.53■□□□□ 0.72
SKP2-208ENST00000546211 UGP2Q16851 508 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 MROH9Q5TGP6 573 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 Q6ZVU0 165 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 CNTN4Q8IWV2 1026 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 SORCS1Q8WY21 1168 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 MYLIPQ8WY64 445 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 PTPRN2Q92932 1015 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 ALKBH8Q96BT7 664 aaKnown RBP19.53■□□□□ 0.72
SKP2-208ENST00000546211 RBBP8Q99708 897 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 TRMT61BQ9BVS5 477 aaKnown RBP19.53■□□□□ 0.72
SKP2-208ENST00000546211 CPEB1Q9BZB8 566 aaKnown RBP19.53■□□□□ 0.72
SKP2-208ENST00000546211 ZDHHC6Q9H6R6 413 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 SSU72Q9NP77 194 aaKnown RBP19.53■□□□□ 0.72
SKP2-208ENST00000546211 NKIRAS1Q9NYS0 192 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 KCTD3Q9Y597 815 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 TNRC18O15417 2968 aaPredicted RBP19.53■□□□□ 0.72
SKP2-208ENST00000546211 DENND4AQ7Z401 1863 aa19.53■□□□□ 0.72
SKP2-208ENST00000546211 PRRC2BQ5JSZ5 2229 aaKnown RBP19.53■□□□□ 0.72
SKP2-208ENST00000546211 TIMM44O43615 452 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms