RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 KCTD3Q9Y597 815 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 PTGDR2Q9Y5Y4 395 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 MYLKQ15746 1914 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 J3KR12 359 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 TNFAIP8O95379 198 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 IGLV3-25P01717 112 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 ITGB1P05556 798 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 PAMP19021 973 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 ARSDP51689 593 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 RPS6KA3P51812 740 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 CDKN2DP55273 166 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 DNAJB13P59910 316 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 PFKPQ01813 784 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 SDHAF4Q5VUM1 108 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 KIAA0930Q6ICG6 404 aaPredicted RBP15.89■□□□□ 0.13
LDLR-204ENST00000545707 CYHR1Q6ZMK1 362 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 USP50Q70EL3 339 aaPredicted RBP15.89■□□□□ 0.13
LDLR-204ENST00000545707 CHSY3Q70JA7 882 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 C3orf30Q96M34 536 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 IL1RL2Q9HB29 575 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 NMUR1Q9HB89 426 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 CRYL1Q9Y2S2 319 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 GJB3O75712 270 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 SUPT7LO94864 414 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 SLC4A1P02730 911 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 FAM163BP0C2L3 166 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 OR4Q2P0C623 313 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 CD86P42081 329 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 ZNF135P52742 658 aaPredicted RBP15.89■□□□□ 0.13
LDLR-204ENST00000545707 EIF4EBP2Q13542 120 aaPredicted RBP15.89■□□□□ 0.13
LDLR-204ENST00000545707 LAMB3Q13751 1172 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 PTPRCAPQ14761 206 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 MTX3Q5HYI7 312 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 MYO1HQ8N1T3 1032 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 RYBPQ8N488 228 aaPredicted RBP15.89■□□□□ 0.13
LDLR-204ENST00000545707 CATSPER1Q8NEC5 780 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 SLC45A3Q96JT2 553 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 ZNF512Q96ME7 567 aaPredicted RBP15.89■□□□□ 0.13
LDLR-204ENST00000545707 CIB1Q99828 191 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 MEAF6Q9HAF1 191 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.89■□□□□ 0.13
LDLR-204ENST00000545707 MARCH4Q9P2E8 410 aaPredicted RBP15.89■□□□□ 0.13
LDLR-204ENST00000545707 EPS15L1Q9UBC2 864 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 RNF11Q9Y3C5 154 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 HS3ST4Q9Y661 456 aa15.89■□□□□ 0.13
LDLR-204ENST00000545707 ANKRD33BA6NCL7 494 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 MYADML2A6NDP7 307 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 LRRC14BA6NHZ5 514 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 E9PAM4 449 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 LTA4HP09960 611 aaKnown RBP15.88■□□□□ 0.13
LDLR-204ENST00000545707 CCR1P32246 355 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 STX5Q13190 355 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 HECTD2Q5U5R9 776 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 AGAP9Q5VTM2 703 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 FAM171BQ6P995 826 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 SCD5Q86SK9 330 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 AHI1Q8N157 1196 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 OR52K2Q8NGK3 314 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 IRGQQ8WZA9 623 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 PABPC5Q96DU9 382 aaKnown RBP15.88■□□□□ 0.13
LDLR-204ENST00000545707 UNC93B1Q9H1C4 597 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 NOL6Q9H6R4 1146 aaKnown RBP15.88■□□□□ 0.13
LDLR-204ENST00000545707 CATSPERBQ9H7T0 1116 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 NOL11Q9H8H0 719 aaKnown RBP15.88■□□□□ 0.13
LDLR-204ENST00000545707 TRAF6Q9Y4K3 522 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 DOCK3Q8IZD9 2030 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 H3BSA7 217 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 MRASO14807 208 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 CAPN15O75808 1086 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 CKMT2P17540 419 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 RPL10P27635 214 aaKnown RBP15.88■□□□□ 0.13
LDLR-204ENST00000545707 SLC5A3P53794 718 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 YBX1P67809 324 aaKnown RBP15.88■□□□□ 0.13
LDLR-204ENST00000545707 ZNF33AQ06730 810 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 SLC10A7Q0GE19 358 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 MANEALQ5VSG8 457 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 KDELC1Q6UW63 502 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 HERC6Q8IVU3 1022 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 OR13J1Q8NGT2 312 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 MRPS26Q9BYN8 205 aaKnown RBP15.88■□□□□ 0.13
LDLR-204ENST00000545707 SENP6Q9GZR1 1112 aaPredicted RBP15.88■□□□□ 0.13
LDLR-204ENST00000545707 GSTO2Q9H4Y5 243 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 AGO3Q9H9G7 860 aaKnown RBP15.88■□□□□ 0.13
LDLR-204ENST00000545707 UTP6Q9NYH9 597 aaKnown RBP15.88■□□□□ 0.13
LDLR-204ENST00000545707 CLEC11AQ9Y240 323 aa15.88■□□□□ 0.13
LDLR-204ENST00000545707 DICER1Q9UPY3 1922 aaKnown RBP15.88■□□□□ 0.13
LDLR-204ENST00000545707 HEATR9A2RTY3 570 aa15.87■□□□□ 0.13
LDLR-204ENST00000545707 TRIM24O15164 1050 aa15.87■□□□□ 0.13
LDLR-204ENST00000545707 SNRPB2P08579 225 aaKnown RBP15.87■□□□□ 0.13
LDLR-204ENST00000545707 HAPLN1P10915 354 aaPredicted RBP15.87■□□□□ 0.13
LDLR-204ENST00000545707 ODC1P11926 461 aa15.87■□□□□ 0.13
LDLR-204ENST00000545707 PCSK6P29122 969 aa15.87■□□□□ 0.13
LDLR-204ENST00000545707 GRIK1P39086 918 aa15.87■□□□□ 0.13
LDLR-204ENST00000545707 POLD2P49005 469 aa15.87■□□□□ 0.13
LDLR-204ENST00000545707 MRPS6P82932 125 aaKnown RBP15.87■□□□□ 0.13
LDLR-204ENST00000545707 DSC2Q02487 901 aa15.87■□□□□ 0.13
LDLR-204ENST00000545707 SQLEQ14534 574 aa15.87■□□□□ 0.13
LDLR-204ENST00000545707 ZNF354CQ86Y25 554 aa15.87■□□□□ 0.13
LDLR-204ENST00000545707 TMEM126BQ8IUX1 230 aa15.87■□□□□ 0.13
LDLR-204ENST00000545707 ZC3H15Q8WU90 426 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms