RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 TP53TG5Q9Y2B4 290 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 DGKBQ9Y6T7 804 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 FBN2P35556 2912 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 CRYBG3Q68DQ2 2970 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 LOC101059948A0A1B0GTJ6 334 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 A1L4Q6 167 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 BECN2A8MW95 431 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 HGSO14964 777 aaPredicted RBP9.47□□□□□ -0.89
CHD4-212ENST00000545083 P4HA2O15460 535 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 POP4O95707 220 aaKnown RBP9.47□□□□□ -0.89
CHD4-212ENST00000545083 TNFP01375 233 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 PCCBP05166 539 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 GNLYP22749 145 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 ALDH4A1P30038 563 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 SLC6A3Q01959 620 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 CDC20Q12834 499 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 KLRB1Q12918 225 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 PNOCQ13519 176 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 DEFB109BQ30KR1 87 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 PTPN20Q4JDL3 420 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 TMEM52BQ4KMG9 183 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 COBLL1Q53SF7 1204 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 SPECC1LQ69YQ0 1117 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 ZNF787Q6DD87 383 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 CAPRIN2Q6IMN6 1127 aaKnown RBP9.47□□□□□ -0.89
CHD4-212ENST00000545083 GDPD4Q6W3E5 623 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 IRF2BP1Q8IU81 584 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 PLA2G15Q8NCC3 412 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 C1orf131Q8NDD1 294 aaKnown RBP9.47□□□□□ -0.89
CHD4-212ENST00000545083 SPATA20Q8TB22 786 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 NT5C3BQ969T7 300 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 C1orf74Q96LT6 269 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 TBCBQ99426 244 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 OSBPL1AQ9BXW6 950 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 ZYG11BQ9C0D3 744 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 INTS2Q9H0H0 1204 aaKnown RBP9.47□□□□□ -0.89
CHD4-212ENST00000545083 DPEP2Q9H4A9 486 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 UBE2TQ9NPD8 197 aaPredicted RBP9.47□□□□□ -0.89
CHD4-212ENST00000545083 OCIAD1Q9NX40 245 aa9.47□□□□□ -0.89
CHD4-212ENST00000545083 AKAP7Q9P0M2 348 aaPredicted RBP9.47□□□□□ -0.89
CHD4-212ENST00000545083 ARHGEF17Q96PE2 2063 aaPredicted RBP9.47□□□□□ -0.89
CHD4-212ENST00000545083 DOCK4Q8N1I0 1966 aa9.46□□□□□ -0.89
CHD4-212ENST00000545083 POLQO75417 2590 aa9.46□□□□□ -0.89
CHD4-212ENST00000545083 INSIG1O15503 277 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 SEMA7AO75326 666 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 ZNF202O95125 648 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 MPSTP25325 297 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 COL8A1P27658 744 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 CD1CP29017 333 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 RNASE9P60153 205 aaKnown RBP9.46□□□□□ -0.9
CHD4-212ENST00000545083 SNRPD1P62314 119 aaKnown RBP9.46□□□□□ -0.9
CHD4-212ENST00000545083 LRRC63Q05C16 580 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 DEUP1Q05D60 604 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 CCDC40Q4G0X9 1142 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 ZNF658Q5TYW1 1059 aaPredicted RBP9.46□□□□□ -0.9
CHD4-212ENST00000545083 NKAIN2Q5VXU1 208 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 GJB7Q6PEY0 223 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 TIPARPQ7Z3E1 657 aaKnown RBP9.46□□□□□ -0.9
CHD4-212ENST00000545083 ZNF438Q7Z4V0 828 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 C17orf82Q86X59 251 aaPredicted RBP9.46□□□□□ -0.9
CHD4-212ENST00000545083 ZNF397Q8NF99 534 aaPredicted RBP9.46□□□□□ -0.9
CHD4-212ENST00000545083 OR56A4Q8NGH8 313 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 APOBEC4Q8WW27 367 aaKnown RBP9.46□□□□□ -0.9
CHD4-212ENST00000545083 PGAP3Q96FM1 320 aaPredicted RBP9.46□□□□□ -0.9
CHD4-212ENST00000545083 DDA1Q9BW61 102 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 SPRY4Q9C004 299 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 GPN2Q9H9Y4 310 aaPredicted RBP9.46□□□□□ -0.9
CHD4-212ENST00000545083 SPATS2LQ9NUQ6 558 aaKnown RBP9.46□□□□□ -0.9
CHD4-212ENST00000545083 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.46□□□□□ -0.91e-8■□□□□ 10.5
CHD4-212ENST00000545083 TMEM9Q9P0T7 183 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 PILRAQ9UKJ1 303 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 SRPK3Q9UPE1 567 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 CHD5Q8TDI0 1954 aa9.46□□□□□ -0.9
CHD4-212ENST00000545083 CXorf51AA0A1B0GTR3 108 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 FAM170AA1A519 330 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 CAPN5O15484 640 aaPredicted RBP9.45□□□□□ -0.9
CHD4-212ENST00000545083 TMCC1O94876 653 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 PIGNO95427 931 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 THRAP10827 490 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 POU3F2P20265 443 aaPredicted RBP9.45□□□□□ -0.9
CHD4-212ENST00000545083 CSF2RBP32927 897 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 LIMK2P53671 638 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 KIAA1024LP59773 190 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 APBA1Q02410 837 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 CETN1Q12798 172 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 MTM1Q13496 603 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 NR1D2Q14995 579 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 POLD3Q15054 466 aaPredicted RBP9.45□□□□□ -0.9
CHD4-212ENST00000545083 AGERQ15109 404 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 RAB6CQ53S08 254 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 FHL5Q5TD97 284 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 ANKS6Q68DC2 871 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 TRNP1Q6NT89 227 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 NRROSQ86YC3 692 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 PELI3Q8N2H9 469 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 AGBL5Q8NDL9 886 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 SSC4DQ8WTU2 575 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 PATE1Q8WXA2 126 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 SPATA32Q96LK8 384 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 LGR4Q9BXB1 951 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms