RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 TMEM52BQ4KMG9 183 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 ANKRD20A2Q5SQ80 823 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 ARMC12Q5T9G4 340 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 ANKRD20A1Q5TYW2 823 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 ANKRD20A3Q5VUR7 823 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 PID1Q7Z2X4 250 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 HORMAD1Q86X24 394 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 ZCCHC9Q8N567 271 aaKnown RBP15.19■□□□□ 0.02
CD9-210ENST00000543916 PIH1D2Q8WWB5 315 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 SMIM14Q96QK8 99 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 HINFPQ9BQA5 517 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 GORASP1Q9BQQ3 440 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 TMEM121Q9BTD3 319 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 WRAP53Q9BUR4 548 aaKnown RBP15.19■□□□□ 0.02
CD9-210ENST00000543916 FRMD8P1Q9BZ68 369 aaPredicted RBP15.19■□□□□ 0.02
CD9-210ENST00000543916 SMARCAL1Q9NZC9 954 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 UBP1Q9NZI7 540 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 TRHDEQ9UKU6 1024 aa15.19■□□□□ 0.02
CD9-210ENST00000543916 PCDH15Q96QU1 1955 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 ADAMTS9Q9P2N4 1935 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 A0A1W2PQ67 120 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 WNT9AO14904 365 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 MMP20O60882 483 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 PRLRP16471 622 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 TGM1P22735 817 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 HOXD12P35452 270 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 POLR2LP62875 67 aaKnown RBP15.18■□□□□ 0.02
CD9-210ENST00000543916 RPS21P63220 83 aaKnown RBP15.18■□□□□ 0.02
CD9-210ENST00000543916 FAM193AP78312 1265 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 ELP6Q0PNE2 266 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 RALGDSQ12967 914 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 SNX1Q13596 522 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 FGL2Q14314 439 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 TCEAL6Q6IPX3 200 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 KIAA1161Q6NSJ0 714 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 ERAP2Q6P179 960 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 FAM71DQ8N9W8 422 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 CCDC110Q8TBZ0 833 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 MAIP1Q8WWC4 291 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 TCEAL3Q969E4 200 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 OXNAD1Q96HP4 312 aaPredicted RBP15.18■□□□□ 0.02
CD9-210ENST00000543916 FEM1CQ96JP0 617 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 SPATA13Q96N96 652 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 FCRL5Q96RD9 977 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 GBA3Q9H227 469 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 PCDH9Q9HC56 1237 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 TM9SF3Q9HD45 589 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 VPS45Q9NRW7 570 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.18■□□□□ 0.02
CD9-210ENST00000543916 B4GALT6Q9UBX8 382 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 RSPH14Q9UHP6 348 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 PHTF1Q9UMS5 762 aa15.18■□□□□ 0.02
CD9-210ENST00000543916 ZFHX2Q9C0A1 2572 aaPredicted RBP15.17■□□□□ 0.02
CD9-210ENST00000543916 C5orf60A6NFR6 353 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 IGLON5A6NGN9 336 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 A8MX80 341 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 CES2O00748 559 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 ZNF185O15231 689 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 SLC31A1O15431 190 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 LRP3O75074 770 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 STK10O94804 968 aaKnown RBP15.17■□□□□ 0.02
CD9-210ENST00000543916 ALPIP09923 528 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 CTPS1P17812 591 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 CA4P22748 312 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 DPP6P42658 865 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 SF3A2Q15428 464 aaKnown RBP15.17■□□□□ 0.02
CD9-210ENST00000543916 SLC14A2Q15849 920 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 PCSK7Q16549 785 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 CCNG2Q16589 344 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 SETMARQ53H47 684 aaPredicted RBP15.17■□□□□ 0.02
CD9-210ENST00000543916 KDELC1Q6UW63 502 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 DPPA4Q7L190 304 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 KDELC2Q7Z4H8 507 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 PRELID2Q8N945 189 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 LPCAT1Q8NF37 534 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 CXorf40AQ8TE69 158 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 SLC6A18Q96N87 628 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 MCCC1Q96RQ3 725 aaPredicted RBP15.17■□□□□ 0.02
CD9-210ENST00000543916 TRIB3Q96RU7 358 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 NAPGQ99747 312 aaPredicted RBP15.17■□□□□ 0.02
CD9-210ENST00000543916 MYOCQ99972 504 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 FERMT1Q9BQL6 677 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 SLC17A9Q9BYT1 436 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 FZD3Q9NPG1 666 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 SEMA4GQ9NTN9 838 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 TTC7AQ9ULT0 858 aaPredicted RBP15.17■□□□□ 0.02
CD9-210ENST00000543916 TPX2Q9ULW0 747 aaKnown RBP15.17■□□□□ 0.02
CD9-210ENST00000543916 ZKSCAN5Q9Y2L8 839 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 COQ6Q9Y2Z9 468 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 PPIL1Q9Y3C6 166 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 TRPM6Q9BX84 2022 aa15.17■□□□□ 0.02
CD9-210ENST00000543916 OTOGLQ3ZCN5 2332 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 GPR179Q6PRD1 2367 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 A0A0U1RQS6 177 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 A0A1B0GTW7 788 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 CFAP69A5D8W1 941 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 NPIPB15A6NHN6 443 aaPredicted RBP15.16■□□□□ 0.02
CD9-210ENST00000543916 PGRMC1O00264 195 aaKnown RBP15.16■□□□□ 0.02
CD9-210ENST00000543916 BCAT2O15382 392 aaPredicted RBP15.16■□□□□ 0.02
CD9-210ENST00000543916 OPHN1O60890 802 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms