RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 RPLP0P05388 317 aaKnown RBP22.81■■□□□ 1.24
CDKN3-207ENST00000543789 UGT1A5P35504 534 aa22.81■■□□□ 1.24
CDKN3-207ENST00000543789 NSFP46459 744 aaKnown RBP22.81■■□□□ 1.24
CDKN3-207ENST00000543789 GSCP56915 257 aaPredicted RBP22.81■■□□□ 1.24
CDKN3-207ENST00000543789 GRM3Q14832 879 aa22.81■■□□□ 1.24
CDKN3-207ENST00000543789 SCYL2Q6P3W7 929 aa22.81■■□□□ 1.24
CDKN3-207ENST00000543789 DNAAF5Q86Y56 855 aa22.81■■□□□ 1.24
CDKN3-207ENST00000543789 JAMLQ86YT9 394 aa22.81■■□□□ 1.24
CDKN3-207ENST00000543789 EXOC2Q96KP1 924 aa22.81■■□□□ 1.24
CDKN3-207ENST00000543789 TMEM74Q96NL1 305 aa22.81■■□□□ 1.24
CDKN3-207ENST00000543789 PCDHB18PQ96TA0 734 aa22.81■■□□□ 1.24
CDKN3-207ENST00000543789 FOXP3Q9BZS1 431 aa22.81■■□□□ 1.24
CDKN3-207ENST00000543789 LRRN3Q9H3W5 708 aa22.81■■□□□ 1.24
CDKN3-207ENST00000543789 CATSPERBQ9H7T0 1116 aa22.81■■□□□ 1.24
CDKN3-207ENST00000543789 LHX3Q9UBR4 397 aa22.81■■□□□ 1.24
CDKN3-207ENST00000543789 KLQ9UEF7 1012 aa22.81■■□□□ 1.24
CDKN3-207ENST00000543789 A0A1W2PQM1 296 aa22.8■■□□□ 1.24
CDKN3-207ENST00000543789 TSPAN11A1L157 253 aa22.8■■□□□ 1.24
CDKN3-207ENST00000543789 SIGLEC16A6NMB1 481 aa22.8■■□□□ 1.24
CDKN3-207ENST00000543789 WASH4PA8MWX3 477 aa22.8■■□□□ 1.24
CDKN3-207ENST00000543789 CREB3O43889 395 aa22.8■■□□□ 1.24
CDKN3-207ENST00000543789 TNFP01375 233 aa22.8■■□□□ 1.24
CDKN3-207ENST00000543789 KLK7P49862 253 aa22.8■■□□□ 1.24
CDKN3-207ENST00000543789 LIG3P49916 1009 aa22.8■■□□□ 1.24
CDKN3-207ENST00000543789 JAM2P57087 298 aa22.8■■□□□ 1.24
CDKN3-207ENST00000543789 CT47A1Q5JQC4 288 aaPredicted RBP22.8■■□□□ 1.24
CDKN3-207ENST00000543789 CFAP58Q5T655 872 aa22.8■■□□□ 1.24
CDKN3-207ENST00000543789 ERAP2Q6P179 960 aa22.8■■□□□ 1.24
CDKN3-207ENST00000543789 WDR92Q96MX6 357 aa22.8■■□□□ 1.24
CDKN3-207ENST00000543789 ZNF641Q96N77 438 aaPredicted RBP22.8■■□□□ 1.24
CDKN3-207ENST00000543789 VPS16Q9H269 839 aa22.8■■□□□ 1.24
CDKN3-207ENST00000543789 NLRC4Q9NPP4 1024 aa22.8■■□□□ 1.24
CDKN3-207ENST00000543789 FAM207AQ9NSI2 230 aaPredicted RBP22.8■■□□□ 1.24
CDKN3-207ENST00000543789 UBA2Q9UBT2 640 aaPredicted RBP22.8■■□□□ 1.24
CDKN3-207ENST00000543789 CCKBRP32239 447 aa22.79■■□□□ 1.24
CDKN3-207ENST00000543789 STAT1P42224 750 aa22.79■■□□□ 1.24
CDKN3-207ENST00000543789 AGERQ15109 404 aa22.79■■□□□ 1.24
CDKN3-207ENST00000543789 BRAT1Q6PJG6 821 aa22.79■■□□□ 1.24
CDKN3-207ENST00000543789 PHF13Q86YI8 300 aaPredicted RBP22.79■■□□□ 1.24
CDKN3-207ENST00000543789 UMODL1-AS1Q8N2C9 162 aa22.79■■□□□ 1.24
CDKN3-207ENST00000543789 C3orf20Q8ND61 904 aa22.79■■□□□ 1.24
CDKN3-207ENST00000543789 RBM15Q96T37 977 aaKnown RBP eCLIP22.79■■□□□ 1.24
CDKN3-207ENST00000543789 DGKBQ9Y6T7 804 aa22.79■■□□□ 1.24
CDKN3-207ENST00000543789 COL6A6A6NMZ7 2263 aa22.79■■□□□ 1.24
CDKN3-207ENST00000543789 SLC28A2O43868 658 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 NOBOXO60393 691 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 BUB1BO60566 1050 aaPredicted RBP22.78■■□□□ 1.24
CDKN3-207ENST00000543789 PCCBP05166 539 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 CALB1P05937 261 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 JMJD7P0C870 316 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 HGFP14210 728 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 RP1P56715 2156 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 KCNC4Q03721 635 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 MTM1Q13496 603 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 CLEC16AQ2KHT3 1053 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 NYAP1Q6ZVC0 841 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 COL27A1Q8IZC6 1860 aaPredicted RBP22.78■■□□□ 1.24
CDKN3-207ENST00000543789 GPR156Q8NFN8 814 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 CLMPQ9H6B4 373 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 DONSONQ9NYP3 566 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 ACSL6Q9UKU0 697 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 FZD10Q9ULW2 581 aa22.78■■□□□ 1.24
CDKN3-207ENST00000543789 KRT10P13645 584 aa22.77■■□□□ 1.24
CDKN3-207ENST00000543789 ZNF143P52747 638 aaPredicted RBP22.77■■□□□ 1.24
CDKN3-207ENST00000543789 AIF1P55008 147 aa22.77■■□□□ 1.24
CDKN3-207ENST00000543789 OGFOD3Q6PK18 319 aa22.77■■□□□ 1.24
CDKN3-207ENST00000543789 USP53Q70EK8 1073 aa22.77■■□□□ 1.24
CDKN3-207ENST00000543789 CAMK1DQ8IU85 385 aa22.77■■□□□ 1.24
CDKN3-207ENST00000543789 CCNJLQ8IV13 435 aa22.77■■□□□ 1.24
CDKN3-207ENST00000543789 Q8N9G6 341 aaPredicted RBP22.77■■□□□ 1.24
CDKN3-207ENST00000543789 TUBGCP5Q96RT8 1024 aa22.77■■□□□ 1.24
CDKN3-207ENST00000543789 PISDQ9UG56 409 aa22.77■■□□□ 1.24
CDKN3-207ENST00000543789 APPL1Q9UKG1 709 aa22.77■■□□□ 1.24
CDKN3-207ENST00000543789 ATP8A1Q9Y2Q0 1164 aa22.77■■□□□ 1.24
CDKN3-207ENST00000543789 CFAP69A5D8W1 941 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 ANKRD62A6NC57 917 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 PYCARD-AS1I3L0S3 204 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 J3KR12 359 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 EPHB6O15197 1021 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 NVLO15381 856 aaKnown RBP22.76■■□□□ 1.23
CDKN3-207ENST00000543789 FGF10O15520 208 aaPredicted RBP22.76■■□□□ 1.23
CDKN3-207ENST00000543789 CCP110O43303 1012 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 TPM2P07951 284 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 GLB1P16278 677 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 MMP12P39900 470 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 TGIF1Q15583 401 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 FKBP15Q5T1M5 1219 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 XKR5Q6UX68 686 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 TAF8Q7Z7C8 310 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 EXD3Q8N9H8 876 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 FAM46DQ8NEK8 389 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 ENOX1Q8TC92 643 aaKnown RBP22.76■■□□□ 1.23
CDKN3-207ENST00000543789 SGF29Q96ES7 293 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 PDXPQ96GD0 296 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 LOXL2Q9Y4K0 774 aa22.76■■□□□ 1.23
CDKN3-207ENST00000543789 CACNB4O00305 520 aaPredicted RBP22.75■■□□□ 1.23
CDKN3-207ENST00000543789 PRKCGP05129 697 aa22.75■■□□□ 1.23
CDKN3-207ENST00000543789 PNLIPP16233 465 aa22.75■■□□□ 1.23
CDKN3-207ENST00000543789 ZFP36L1Q07352 338 aaKnown RBP22.75■■□□□ 1.23
CDKN3-207ENST00000543789 KRT31Q15323 416 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms