RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 HS6ST1O60243 411 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 GSTM1P09488 218 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 BGNP21810 368 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 FECHP22830 423 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 WARSP23381 471 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 NTSP30990 170 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 CSTF3Q12996 717 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 SEMA3AQ14563 771 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 TRIP10Q15642 601 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 AGKQ53H12 422 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 ZDHHC20Q5W0Z9 365 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 CNSTQ6PJW8 725 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 POTEHQ6S545 545 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC51AQ86UW1 340 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 CLYBLQ8N0X4 340 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 ZCCHC9Q8N567 271 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 LSM14AQ8ND56 463 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 SELENOMQ8WWX9 145 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 MAGEB18Q96M61 343 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC39A8Q9C0K1 460 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 PCDH18Q9HCL0 1135 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 RPS6KA6Q9UK32 745 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 CHKBQ9Y259 395 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 EFR3BQ9Y2G0 817 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 hCG_1818297A0A087WSY0 165 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 A0A1W2PRU2 124 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 E9PAM4 449 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 LIASO43766 372 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 CDK14O94921 469 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 ZNF682O95780 498 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 LTA4HP09960 611 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 BMP6P22004 513 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 LRPAP1P30533 357 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 HTR7P34969 479 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 HPCAL1P37235 193 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 ABCG1P45844 678 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 CDK7P50613 346 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 SEC24CP53992 1094 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 CDH4P55283 916 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 ILF3Q12906 894 aaKnown RBP eCLIP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 TBX2Q13207 712 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 UNC5AQ6ZN44 842 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 ADAMTSL2Q86TH1 951 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 SYT12Q8IV01 421 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 CDK20Q8IZL9 346 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 EFCAB3Q8N7B9 438 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 POF1BQ8WVV4 589 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 CYGBQ8WWM9 190 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 HDAC2Q92769 488 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 INPP5DQ92835 1189 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 PLD4Q96BZ4 506 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 MMADHCQ9H3L0 296 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 L2HGDHQ9H9P8 463 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 ZDHHC4Q9NPG8 344 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 TCF7L2Q9NQB0 619 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 RHBDL2Q9NX52 303 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 RCOR3Q9P2K3 495 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 KLQ9UEF7 1012 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 TMEM191CA6NGB0 347 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 SNTNA6NMZ2 147 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 SGTAO43765 313 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 FSHRP23945 695 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 VEGFBP49765 207 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 CCR4P51679 360 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 CYP4F8P98187 520 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 GNA12Q03113 381 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 ACTN3Q08043 901 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 CYTH1Q15438 398 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 LRRC36Q1X8D7 754 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 SNAP47Q5SQN1 464 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 FAM126BQ8IXS8 530 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 BAP1Q92560 729 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 COL26A1Q96A83 441 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 TMEM175Q9BSA9 504 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 NTPCRQ9BSD7 190 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 FGFBP2Q9BYJ0 223 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 CCDC134Q9H6E4 229 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 ALG9Q9H6U8 611 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 AGO3Q9H9G7 860 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 TLR9Q9NR96 1032 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 NINJ2Q9NZG7 142 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 KCNE2Q9Y6J6 123 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 KCPQ6ZWJ8 1503 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 NCANO14594 1321 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 ZNF536O15090 1300 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 TAF4O00268 1085 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 CCDC166P0CW27 439 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 MC4RP32245 332 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 RPL22P35268 128 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 ST13P50502 369 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 HNRNPH2P55795 449 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 RPS7P62081 194 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 RGS1Q08116 209 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 ABRQ12979 859 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 MSLNQ13421 630 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 MOGSQ13724 837 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 ZNHIT3Q15649 155 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 PFKFB4Q16877 469 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 PMF1Q6P1K2 205 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 CRTC1Q6UUV9 634 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms