RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 AGAP3Q96P47 875 aa4.25□□□□□ -1.73
MDM2-229ENST00000543046 REEP2Q9BRK0 252 aa4.25□□□□□ -1.73
MDM2-229ENST00000543046 FUT8Q9BYC5 575 aa4.25□□□□□ -1.73
MDM2-229ENST00000543046 PLAC1Q9HBJ0 212 aa4.25□□□□□ -1.73
MDM2-229ENST00000543046 RIC8AQ9NPQ8 531 aa4.25□□□□□ -1.73
MDM2-229ENST00000543046 NCKIPSDQ9NZQ3 722 aa4.25□□□□□ -1.73
MDM2-229ENST00000543046 SEL1LQ9UBV2 794 aa4.25□□□□□ -1.73
MDM2-229ENST00000543046 FBXO40Q9UH90 709 aa4.25□□□□□ -1.73
MDM2-229ENST00000543046 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.25□□□□□ -1.731e-8■□□□□ 8.5
MDM2-229ENST00000543046 INSL5Q9Y5Q6 135 aa4.25□□□□□ -1.73
MDM2-229ENST00000543046 ARHGEF12Q9NZN5 1544 aa4.25□□□□□ -1.73
MDM2-229ENST00000543046 RAD54L2Q9Y4B4 1467 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 PTPRGP23470 1445 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 BECN2A8MW95 431 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 PDLIM1O00151 329 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 HSPB6O14558 160 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 AP5Z1O43299 807 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 EPB41L2O43491 1005 aaKnown RBP4.24□□□□□ -1.73
MDM2-229ENST00000543046 TSPAN3O60637 253 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 CKMT1AP12532 417 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 CD72P21854 359 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 ARRB2P32121 409 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 NF2P35240 595 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 RDXP35241 583 aaKnown RBP4.24□□□□□ -1.73
MDM2-229ENST00000543046 RFC1P35251 1148 aaPredicted RBP4.24□□□□□ -1.73
MDM2-229ENST00000543046 PPP3CCP48454 512 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 LMAN1P49257 510 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 ENTPD1P49961 510 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 ZNF75DP51815 510 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 RPE65Q16518 533 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 FBXO43Q4G163 708 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 FILIP1LQ4L180 1135 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 MAP3K21Q5TCX8 1036 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 HEPHL1Q6MZM0 1159 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 CHD1LQ86WJ1 897 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 ZNF354CQ86Y25 554 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 ZDHHC17Q8IUH5 632 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 CPOQ8IVL8 374 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 APLFQ8IW19 511 aaPredicted RBP4.24□□□□□ -1.73
MDM2-229ENST00000543046 LRRC8AQ8IWT6 810 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 ZDHHC23Q8IYP9 409 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 CADM3Q8N126 398 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 CCAR2Q8N163 923 aaKnown RBP4.24□□□□□ -1.73
MDM2-229ENST00000543046 GHDCQ8N2G8 530 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 TDRD7Q8NHU6 1098 aaKnown RBP4.24□□□□□ -1.73
MDM2-229ENST00000543046 CEP76Q8TAP6 659 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 STAMQ92783 540 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 SH3KBP1Q96B97 665 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 CABS1Q96KC9 395 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 SF3B5Q9BWJ5 86 aaKnown RBP4.24□□□□□ -1.73
MDM2-229ENST00000543046 RANBP17Q9H2T7 1088 aaKnown RBP4.24□□□□□ -1.73
MDM2-229ENST00000543046 CATSPERBQ9H7T0 1116 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 IRAK4Q9NWZ3 460 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 DDX19BQ9UMR2 479 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 EXOC6BQ9Y2D4 811 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 CLDN16Q9Y5I7 305 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 KDM5DQ9BY66 1539 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 RTL1A6NKG5 1358 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 ATP10AO60312 1499 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 SNAPC4Q5SXM2 1469 aa4.24□□□□□ -1.73
MDM2-229ENST00000543046 TTC41PQ6P2S7 1318 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 PHLPP2Q6ZVD8 1323 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 ARHGEF11O15085 1522 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 FAM90A8PA6NJQ4 464 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 FAM90A7PA6NKC0 464 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 SH2D7A6NKC9 451 aaPredicted RBP4.23□□□□□ -1.73
MDM2-229ENST00000543046 FAM90A22PA8MWA6 464 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 FAM90A12PA8MX19 464 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 FAM90A23PA8MXZ1 464 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 FAM157AC9JC47 383 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 I6L893 689 aaPredicted RBP4.23□□□□□ -1.73
MDM2-229ENST00000543046 ADAP00813 363 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 IL1AP01583 271 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 LCATP04180 440 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 FAM90A13PP0C7W8 464 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 FAM90A24PP0C7X0 464 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 ENO3P13929 434 aaPredicted RBP4.23□□□□□ -1.73
MDM2-229ENST00000543046 YWHAQP27348 245 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 PPP2R1AP30153 589 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 MAN1A1P33908 653 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 RFX5P48382 616 aaPredicted RBP4.23□□□□□ -1.73
MDM2-229ENST00000543046 FNTAP49354 379 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 PPM1FP49593 454 aaPredicted RBP4.23□□□□□ -1.73
MDM2-229ENST00000543046 CDH12P55289 794 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 GSDMDP57764 484 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 ZP1P60852 638 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 ROR2Q01974 943 aaKnown RBP4.23□□□□□ -1.73
MDM2-229ENST00000543046 UBE3AQ05086 875 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 TBL3Q12788 808 aaKnown RBP4.23□□□□□ -1.73
MDM2-229ENST00000543046 MAPK7Q13164 816 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 TMED1Q13445 227 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 BIRC3Q13489 604 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 TUBB2AQ13885 445 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 MYBPC2Q14324 1141 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 SLMAPQ14BN4 828 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 TAF12Q16514 161 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 SLC18A3Q16572 532 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 OTUD1Q5VV17 481 aaPredicted RBP4.23□□□□□ -1.73
MDM2-229ENST00000543046 TTC19Q6DKK2 380 aaPredicted RBP4.23□□□□□ -1.73
MDM2-229ENST00000543046 ZNF517Q6ZMY9 492 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms