RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 OMDQ99983 421 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 TMEM120AQ9BXJ8 343 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 TRIM55Q9BYV6 548 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 SCUBE2Q9NQ36 999 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 ANKRD36A6QL64 1941 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 PER2O15055 1255 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 MYL2P10916 166 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 PAMP19021 973 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 MAGEA9P43362 315 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 CLCN4P51793 760 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 BNIP1Q12981 228 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 STX3Q13277 289 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 CDH18Q13634 790 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 SLC5A9Q2M3M2 681 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 KIF2BQ8N4N8 673 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 TDRD5Q8NAT2 981 aaKnown RBP17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 MDGA1Q8NFP4 955 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 RMDN1Q96DB5 314 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 TM6SF2Q9BZW4 377 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 TLR9Q9NR96 1032 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 HAUS2Q9NVX0 235 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 ASB3Q9Y575 518 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 LEFTY2O00292 366 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 GRM6O15303 877 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 NDST3O95803 873 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 TROVE2P10155 538 aaKnown RBP eCLIP17.35■□□□□ 0.371e-6■■■■■ 57.6
TMEM50B-210ENST00000542230 CPA3P15088 417 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 EPCAMP16422 314 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 GKP32189 559 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 CCR10P46092 362 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 CD151P48509 253 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 NCALDP61601 193 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 TRAF2Q12933 501 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 INSCQ1MX18 579 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 TTC7BQ86TV6 843 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 CILP2Q8IUL8 1156 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 MFN1Q8IWA4 741 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 HJURPQ8NCD3 748 aaPredicted RBP17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 PPP1R14CQ8TAE6 165 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 SHKBP1Q8TBC3 707 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 SP7Q8TDD2 431 aaPredicted RBP17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 NXNL1Q96CM4 212 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 LRRC37BQ96QE4 947 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 TASP1Q9H6P5 420 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 ECT2Q9H8V3 914 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 LHX3Q9UBR4 397 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 CRYL1Q9Y2S2 319 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 RAI2Q9Y5P3 530 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 MYO9BQ13459 2157 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 CCDC162PA2VCL2 907 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 LINC01553A4QN01 128 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 MOSPD3O75425 235 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 PRAMEF12O95522 483 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 GOT2P00505 430 aaKnown RBP17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 MPOP05164 745 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 FGF1P05230 155 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 HLA-DPA1P20036 260 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 CD70P32970 193 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 LPCAT1Q8NF37 534 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 FAM136AQ96C01 138 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 TDRD1Q9BXT4 1180 aaKnown RBP17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 NMRAL1Q9HBL8 299 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 ASAH2Q9NR71 780 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 HEY2Q9UBP5 337 aa17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 RUVBL2Q9Y230 463 aaKnown RBP17.35■□□□□ 0.37
TMEM50B-210ENST00000542230 NOTCH4Q99466 2003 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 SERPINB3P29508 390 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 PRAMEP78395 509 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 SLC7A9P82251 487 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 CREMQ03060 361 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 TEAD2Q15562 447 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 ATG16L1Q676U5 607 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 CCDC149Q6ZUS6 474 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 HTR3DQ70Z44 454 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 ALYREFQ86V81 257 aaKnown RBP17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 GPR65Q8IYL9 337 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 CMTM8Q8IZV2 173 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 C7orf26Q96N11 449 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 GPR78Q96P69 363 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 SORT1Q99523 831 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 DDX50Q9BQ39 737 aaKnown RBP17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 NSMCE4AQ9NXX6 385 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 DNMT3BQ9UBC3 853 aaKnown RBP17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 TLK1Q9UKI8 766 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 FNDC3AQ9Y2H6 1198 aaKnown RBP17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 SH3BP1Q9Y3L3 701 aa17.34■□□□□ 0.37
TMEM50B-210ENST00000542230 PAPSS2O95340 614 aaPredicted RBP17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 CBX6O95503 412 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 S1PR4O95977 384 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 EPOP01588 193 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 ABL2P42684 1182 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 SLC1A6P48664 564 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 ARFIP2P53365 341 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 RAB10P61026 200 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 TAF1BQ53T94 588 aaPredicted RBP17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 PPM1LQ5SGD2 360 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 FAM217AQ8IXS0 508 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 BBS5Q8N3I7 341 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 BRSK1Q8TDC3 778 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 MYLIPQ8WY64 445 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms