RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 MGARPQ8TDB4 240 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 CHAC2Q8WUX2 184 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 PTPRN2Q92932 1015 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 NRBF2Q96F24 287 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 NOX5Q96PH1 765 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 TWNKQ96RR1 684 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 NCOR1P1Q9H4R4 102 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 ZNF768Q9H5H4 540 aaKnown RBP7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 SYNDIG1Q9H7V2 258 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 EPB41L5Q9HCM4 733 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 FZD3Q9NPG1 666 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 PRDM9Q9NQV7 894 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 GPR27Q9NS67 375 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 DNAJC28Q9NX36 388 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 UBAP1Q9NZ09 502 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 ERVW-1Q9UQF0 538 aa7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 V9GYY5 206 aaPredicted RBP7.86□□□□□ -1.15
NPIPB4-215ENST00000542133 PRAMEF33A0A0G2JMD5 474 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 FAM221AA4D161 298 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 SYNDIG1LA6NDD5 238 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 NTN3O00634 580 aaPredicted RBP7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 NVLO15381 856 aaKnown RBP7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 SLC31A1O15431 190 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 MTSS1O43312 755 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 PRAMEF10O60809 474 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 DIAPH2O60879 1101 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 TBL1XO60907 577 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 ZNF254O75437 659 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 PAHP00439 452 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 KRT1P04264 644 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 S100A6P06703 90 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 SRPRAP08240 638 aaKnown RBP7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 SLFN14P0C7P3 912 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 NME1P15531 152 aaKnown RBP7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 TPP2P29144 1249 aaPredicted RBP7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 UQCRFS1P47985 274 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 YWHAGP61981 247 aaKnown RBP eCLIP7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 RCN1Q15293 331 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 NR0B2Q15466 257 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 OASLQ15646 514 aaKnown RBP7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 DEFB133Q30KQ1 61 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 NUGGCQ68CJ6 796 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 RFWD3Q6PCD5 774 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 LEKR1Q6ZMV7 388 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 ABI3BPQ7Z7G0 1075 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 UNC93AQ86WB7 457 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 ZFAND4Q86XD8 727 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 FAM114A1Q8IWE2 563 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 ARHGAP18Q8N392 663 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 TRIM58Q8NG06 486 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 OR52K2Q8NGK3 314 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 C9orf43Q8TAL5 461 aaPredicted RBP7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 SSC4DQ8WTU2 575 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 CTNNBL1Q8WYA6 563 aaPredicted RBP7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 NAT6Q93015 286 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 PRICKLE1Q96MT3 831 aaPredicted RBP7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 COG8Q96MW5 612 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 CCDC3Q9BQI4 270 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 NUDT16L1Q9BRJ7 211 aaKnown RBP7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 SLC12A9Q9BXP2 914 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 ASPSCR1Q9BZE9 553 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 RASSF4Q9H2L5 321 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 TNMDQ9H2S6 317 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 PREBQ9HCU5 417 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 TUBA8Q9NY65 449 aaPredicted RBP7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 FOXJ2Q9P0K8 574 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 PDP2Q9P2J9 529 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 STK17AQ9UEE5 414 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 PISDQ9UG56 409 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 SALL4Q9UJQ4 1053 aa7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 HBS1LQ9Y450 684 aaKnown RBP7.85□□□□□ -1.15
NPIPB4-215ENST00000542133 A1L4Q6 167 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 D6RAR5 112 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 H3BM21 787 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 STX6O43752 255 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 ZBTB14O43829 449 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 PHACTR2O75167 634 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 CSF2P04141 144 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 JMJD7P0C870 316 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 VAV1P15498 845 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 HNRNPA2B1P22626 353 aaKnown RBP7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 ATP5DP30049 168 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 SLC6A4P31645 630 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 HOXD13P35453 343 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 LONP1P36776 959 aaKnown RBP7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 DCTP40126 519 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 ASPAP45381 313 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 RPIAP49247 311 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 NEK4P51957 841 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 OXCT1P55809 520 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 CLDN2P57739 230 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 TAS2R38P59533 333 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 POLR2FP61218 127 aaKnown RBP7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 TUBA1BP68363 451 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 CNTN1Q12860 1018 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 NCOA4Q13772 614 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 PPP1R7Q15435 360 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 SWI5Q1ZZU3 235 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 PITRM1Q5JRX3 1037 aa7.84□□□□□ -1.15
NPIPB4-215ENST00000542133 PIK3R6Q5UE93 754 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms