RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 FBXO43Q4G163 708 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 CAVIN1Q6NZI2 390 aaKnown RBP5.4□□□□□ -1.54
CIT-211ENST00000541841 WDR93Q6P2C0 686 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 TRAT1Q6PIZ9 186 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 DCDC5Q6ZRR9 648 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 RNF144BQ7Z419 303 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 GLRX5Q86SX6 157 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 KBTBD6Q86V97 674 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 ARHGAP12Q8IWW6 846 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.4□□□□□ -1.54
CIT-211ENST00000541841 PIGOQ8TEQ8 1089 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 SECISBP2LQ93073 1101 aaKnown RBP5.4□□□□□ -1.54
CIT-211ENST00000541841 ZKSCAN4Q969J2 545 aaPredicted RBP5.4□□□□□ -1.54
CIT-211ENST00000541841 SAT2Q96F10 170 aaPredicted RBP5.4□□□□□ -1.54
CIT-211ENST00000541841 C1orf74Q96LT6 269 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 GLIS2Q9BZE0 524 aaPredicted RBP5.4□□□□□ -1.54
CIT-211ENST00000541841 FBRSL1Q9HCM7 1045 aaKnown RBP5.4□□□□□ -1.54
CIT-211ENST00000541841 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.4□□□□□ -1.54
CIT-211ENST00000541841 SLC22A11Q9NSA0 550 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 C20orf141Q9NUB4 165 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 TMEM184CQ9NVA4 438 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 SELENONQ9NZV5 590 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 MARCH4Q9P2E8 410 aaPredicted RBP5.4□□□□□ -1.54
CIT-211ENST00000541841 MGAT4CQ9UBM8 478 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 CDH22Q9UJ99 828 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 PADI1Q9ULC6 663 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 NENFQ9UMX5 172 aa5.4□□□□□ -1.54
CIT-211ENST00000541841 ADGRF5Q8IZF2 1346 aa5.4□□□□□ -1.55
CIT-211ENST00000541841 CYP3A7-CYP3A51PA0A087WV96 503 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 A8MVJ9 347 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 BTBD19C9JJ37 291 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 SOCS2O14508 198 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 CEP104O60308 925 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 ALDOAP04075 364 aaKnown RBP5.39□□□□□ -1.55
CIT-211ENST00000541841 GALTP07902 379 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 MYBL1P10243 752 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 CYP4B1P13584 511 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 ATF7P17544 494 aaPredicted RBP5.39□□□□□ -1.55
CIT-211ENST00000541841 MMP8P22894 467 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 CYP3A7P24462 503 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 LMAN1P49257 510 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 B4GALNT1Q00973 533 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 C17orf67Q0P5P2 114 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 ALKBH1Q13686 389 aaKnown RBP5.39□□□□□ -1.55
CIT-211ENST00000541841 NFE2L1Q14494 772 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 SLMAPQ14BN4 828 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 LARS2Q15031 903 aaKnown RBP5.39□□□□□ -1.55
CIT-211ENST00000541841 SLC18A3Q16572 532 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 C9orf152Q5JTZ5 239 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 SARM1Q6SZW1 724 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 RAPH1Q70E73 1250 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 PIWIL3Q7Z3Z3 882 aaKnown RBP5.39□□□□□ -1.55
CIT-211ENST00000541841 BRSK2Q8IWQ3 736 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 SYT2Q8N9I0 419 aaPredicted RBP5.39□□□□□ -1.55
CIT-211ENST00000541841 MOSPD2Q8NHP6 518 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 C2CD4CQ8TF44 421 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 FAM149B1Q96BN6 582 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 COQ8BQ96D53 544 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 CCDC34Q96HJ3 373 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 FER1L6-AS2Q96M78 137 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 HS6ST2Q96MM7 605 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 GBP5Q96PP8 586 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 TRIM31Q9BZY9 425 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 CDCP1Q9H5V8 836 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 RXFP3Q9NSD7 469 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 RRP7BPQ9NSQ0 103 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 DNAJB9Q9UBS3 223 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 FBXL17Q9UF56 701 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 SESN1Q9Y6P5 492 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 VPS8Q8N3P4 1428 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 ARAP1Q96P48 1450 aa5.39□□□□□ -1.55
CIT-211ENST00000541841 OR2A25A4D2G3 310 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 C3orf70A6NLC5 250 aaPredicted RBP5.38□□□□□ -1.55
CIT-211ENST00000541841 KCNJ18B7U540 433 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 KCNAB3O43448 404 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 FTCDO95954 541 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 FGBP02675 491 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 CHRM4P08173 479 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 GP5P40197 560 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 PTPN9P43378 593 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 RPS6KA3P51812 740 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 POLGP54098 1239 aaPredicted RBP5.38□□□□□ -1.55
CIT-211ENST00000541841 MFAP4P55083 255 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 LINC00205P59089 165 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 YPEL5P62699 121 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 SMC1AQ14683 1233 aaKnown RBP5.38□□□□□ -1.55
CIT-211ENST00000541841 KCNB1Q14721 858 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 DPCR1Q3MIW9 517 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 GXYLT1Q4G148 440 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 GJB7Q6PEY0 223 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 SUSD1Q6UWL2 747 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 C17orf99Q6UX52 265 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 RANBP10Q6VN20 620 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 LINC01465Q8N7H1 131 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 C16orf52Q8NHV5 167 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 ZNF398Q8TD17 642 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 NOC3LQ8WTT2 800 aaKnown RBP5.38□□□□□ -1.55
CIT-211ENST00000541841 DEPDC1BQ8WUY9 529 aa5.38□□□□□ -1.55
CIT-211ENST00000541841 MRPS27Q92552 414 aaKnown RBP5.38□□□□□ -1.55
CIT-211ENST00000541841 VPS50Q96JG6 964 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms