RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PDE1BQ01064 536 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 SEMA3AQ14563 771 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 INO80DQ53TQ3 878 aaPredicted RBP12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 TCEAL5Q5H9L2 206 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 PITRM1Q5JRX3 1037 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 DGKKQ5KSL6 1271 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 LY6G5CQ5SRR4 150 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 RBM20Q5T481 1227 aaKnown RBP12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 N4BP2L1Q5TBK1 243 aaPredicted RBP12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 NEPROQ6NW34 567 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 CNSTQ6PJW8 725 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 C2CD4AQ8NCU7 369 aaPredicted RBP12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 ASIC4Q96FT7 647 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 SAMD11Q96NU1 681 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 GPR22Q99680 433 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 VPS11Q9H270 941 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 KIAA1522Q9P206 1035 aaPredicted RBP12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 TXNDC16Q9P2K2 825 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 SLC39A10Q9ULF5 831 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 MRPS23Q9Y3D9 190 aaKnown RBP12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 NUP210Q8TEM1 1887 aaPredicted RBP12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 REV3LO60673 3130 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 CCDC162PA2VCL2 907 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 ANKRD65E5RJM6 399 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 LINC01565O15544 149 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 PHGDHO43175 533 aaKnown RBP12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 FZD6O60353 706 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 PAPSS2O95340 614 aaPredicted RBP12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 PIGNO95427 931 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 SAT1P21673 171 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 VIPR2P41587 438 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 ACVR1Q04771 509 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 SLC14A2Q15849 920 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 TMEM215Q68D42 235 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 TRIM68Q6AZZ1 485 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 C6orf89Q6UWU4 347 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 RGS9BPQ6ZS82 235 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 PTAR1Q7Z6K3 402 aaPredicted RBP12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 SRLQ86TD4 932 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 CAMK1DQ8IU85 385 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 CEP97Q8IW35 865 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 PDCD6IPQ8WUM4 868 aaKnown RBP12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 IRF7Q92985 503 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 RHOJQ9H4E5 214 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 ZNF395Q9H8N7 513 aaPredicted RBP12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 TMEM216Q9P0N5 145 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 EVLQ9UI08 416 aaPredicted RBP12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 FBXO5Q9UKT4 447 aa12.34□□□□□ -0.43
AP003559.1-201ENST00000540906 SNX3O60493 162 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 GLP2RO95838 553 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 SLC4A1P02730 911 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 C2P06681 752 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 TYK2P29597 1187 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 ABL2P42684 1182 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 SERPINB8P50452 374 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 ZNF140P52738 457 aaPredicted RBP12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 PLK1P53350 603 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 THOC5Q13769 683 aaKnown RBP12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 SPRED3Q2MJR0 410 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 PPP2R2DQ66LE6 453 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 PDE12Q6L8Q7 609 aaKnown RBP12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 ATG14Q6ZNE5 492 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 OTOAQ7RTW8 1153 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 CLEC14AQ86T13 490 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 ZSWIM9Q86XI8 627 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 NAT16Q8N8M0 369 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 BRSK1Q8TDC3 778 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 ACMSDQ8TDX5 336 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 RMDN1Q96DB5 314 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 NDNQ99608 321 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 C2orf49Q9BVC5 232 aaPredicted RBP12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 BBS2Q9BXC9 721 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 PIDD1Q9HB75 910 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 SPHK2Q9NRA0 654 aa12.33□□□□□ -0.44
AP003559.1-201ENST00000540906 A0A096LPK6 155 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 PLIN3O60664 434 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 EDF1O60869 148 aaKnown RBP12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 DNAJC6O75061 913 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 GOT2P00505 430 aaKnown RBP12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 POU2F2P09086 479 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 SRCP12931 536 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 TYRP14679 529 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 CTPS1P17812 591 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 NSUN2Q08J23 767 aaKnown RBP eCLIP12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 MESP2Q0VG99 397 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 DLG1Q12959 904 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 SEPT7Q16181 437 aaKnown RBP12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 RARS2Q5T160 578 aaKnown RBP12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 ADGRG2Q8IZP9 1017 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 TTC30BQ8N4P2 665 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 EFHBQ8N7U6 833 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 LEMD2Q8NC56 503 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 OR6P1Q8NGX9 317 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 LRRC8CQ8TDW0 803 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 SORCS1Q8WY21 1168 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 EID2BQ96D98 161 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 OLFM1Q99784 485 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 C1QTNF1Q9BXJ1 281 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 MFSD1Q9H3U5 465 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms