RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 DCP2Q8IU60 420 aaKnown RBP9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 SLC34A3Q8N130 599 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 CFAP52Q8N1V2 620 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 ATP6V0D2Q8N8Y2 350 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 TMEM145Q8NBT3 493 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 WFDC5Q8TCV5 224 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 RNF34Q969K3 372 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 TTC17Q96AE7 1141 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 TMEM159Q96B96 161 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 BTN2A3PQ96KV6 586 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 FAM129BQ96TA1 746 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 SELENOOQ9BVL4 669 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 TKTL2Q9H0I9 626 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 FAM204AQ9H8W3 233 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 ABHD10Q9NUJ1 306 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 DKK3Q9UBP4 350 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 SNX10Q9Y5X0 201 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 HS3ST4Q9Y661 456 aa9.01□□□□□ -0.97
TRAPPC1-202ENST00000540486 SPENQ96T58 3664 aaKnown RBP9□□□□□ -0.97
TRAPPC1-202ENST00000540486 EDDM13A0A1B0GTR0 161 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 TMEM191CA6NGB0 347 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 WIPF3A6NGB9 483 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9□□□□□ -0.97
TRAPPC1-202ENST00000540486 PLRG1O43660 514 aaKnown RBP9□□□□□ -0.97
TRAPPC1-202ENST00000540486 MFAP3LO75121 409 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 SEMA7AO75326 666 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 NEBLO76041 1014 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 APOEP02649 317 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 PRKCGP05129 697 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 SLC2A3P11169 496 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 GPD1P21695 349 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 GNLYP22749 145 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 ADRA1BP35368 520 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 PTPN9P43378 593 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 UQCRFS1P47985 274 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 PSMD8P48556 350 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 IRAK1P51617 712 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 MLLT10P55197 1068 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 HDAC4P56524 1084 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 AUHQ13825 339 aaKnown RBP9□□□□□ -0.97
TRAPPC1-202ENST00000540486 TRIM14Q14142 442 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 CDO1Q16878 200 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 C5orf22Q49AR2 442 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 TDRD12Q587J7 1177 aaKnown RBP9□□□□□ -0.97
TRAPPC1-202ENST00000540486 FSCBQ5H9T9 825 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 BRMS1LQ5PSV4 323 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 PERM1Q5SV97 790 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 ALKBH5Q6P6C2 394 aaKnown RBP9□□□□□ -0.97
TRAPPC1-202ENST00000540486 CRTC1Q6UUV9 634 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 ZC3H18Q86VM9 953 aaKnown RBP9□□□□□ -0.97
TRAPPC1-202ENST00000540486 FAM131BQ86XD5 332 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 ZFAND4Q86XD8 727 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 ZNF683Q8IZ20 524 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 LGI2Q8N0V4 545 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 ARFGAP1Q8N6T3 406 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 TC2NQ8N9U0 490 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 FIBINQ8TAL6 211 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 MRFAP1L1Q96HT8 127 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 C1orf74Q96LT6 269 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 TMEM74Q96NL1 305 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 IL12RB2Q99665 862 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 DDX50Q9BQ39 737 aaKnown RBP9□□□□□ -0.97
TRAPPC1-202ENST00000540486 CALN1Q9BXU9 219 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 TRIM7Q9C029 511 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 EPB41L5Q9HCM4 733 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 DONSONQ9NYP3 566 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 STIM2Q9P246 746 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 CNOT8Q9UFF9 292 aaKnown RBP9□□□□□ -0.97
TRAPPC1-202ENST00000540486 SLC12A6Q9UHW9 1150 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 FBN3Q75N90 2809 aa9□□□□□ -0.97
TRAPPC1-202ENST00000540486 ZFC3H1O60293 1989 aaKnown RBP9□□□□□ -0.97
TRAPPC1-202ENST00000540486 COL27A1Q8IZC6 1860 aaPredicted RBP9□□□□□ -0.97
TRAPPC1-202ENST00000540486 PRAMEF33A0A0G2JMD5 474 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 SSU72P8A0A1W2PR75 194 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 DRGXA6NNA5 263 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 AKR1B15C9JRZ8 316 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 H3BM21 787 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 MUSKO15146 869 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 CCP110O43303 1012 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 PRAMEF10O60809 474 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 IL1BP01584 269 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 CSF2P04141 144 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 SRPRAP08240 638 aaKnown RBP8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 SDC4P31431 198 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 CCKBRP32239 447 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 CD70P32970 193 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 DRD3P35462 400 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 ZNF143P52747 638 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 POM121L1PQ3SYA9 428 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 LACTB2Q53H82 288 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 CCDC122Q5T0U0 273 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 PPP1R2P3Q6NXS1 205 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 DNAJC24Q6P3W2 148 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 STRADAQ7RTN6 431 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 CYP4X1Q8N118 509 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 TEX19Q8NA77 164 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 ZNF548Q8NEK5 533 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 OR52K2Q8NGK3 314 aa8.99□□□□□ -0.97
TRAPPC1-202ENST00000540486 GPBAR1Q8TDU6 330 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms