RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 SLC30A10Q6XR72 485 aa8.8□□□□□ -1
YBX3-208ENST00000540447 ZNF410Q86VK4 478 aa8.8□□□□□ -1
YBX3-208ENST00000540447 DEDD2Q8WXF8 326 aa8.8□□□□□ -1
YBX3-208ENST00000540447 KAT2AQ92830 837 aa8.8□□□□□ -1
YBX3-208ENST00000540447 MUC13Q9H3R2 512 aa8.8□□□□□ -1
YBX3-208ENST00000540447 ACSS3Q9H6R3 686 aa8.8□□□□□ -1
YBX3-208ENST00000540447 LRRC19Q9H756 370 aa8.8□□□□□ -1
YBX3-208ENST00000540447 IFT52Q9Y366 437 aa8.8□□□□□ -1
YBX3-208ENST00000540447 SNX9Q9Y5X1 595 aa8.8□□□□□ -1
YBX3-208ENST00000540447 TAF6LQ9Y6J9 622 aa8.8□□□□□ -1
YBX3-208ENST00000540447 FXYD6-FXYD2A0A087WZ82 144 aa8.8□□□□□ -1
YBX3-208ENST00000540447 SLC30A4O14863 429 aa8.8□□□□□ -1
YBX3-208ENST00000540447 ACOX3O15254 700 aa8.8□□□□□ -1
YBX3-208ENST00000540447 GPIP06744 558 aa8.8□□□□□ -1
YBX3-208ENST00000540447 HNMTP50135 292 aa8.8□□□□□ -1
YBX3-208ENST00000540447 EIF5AP63241 154 aaKnown RBP8.8□□□□□ -1
YBX3-208ENST00000540447 GALEQ14376 348 aa8.8□□□□□ -1
YBX3-208ENST00000540447 OGFRL1Q5TC84 451 aaPredicted RBP8.8□□□□□ -1
YBX3-208ENST00000540447 PIK3R6Q5UE93 754 aa8.8□□□□□ -1
YBX3-208ENST00000540447 CDK20Q8IZL9 346 aa8.8□□□□□ -1
YBX3-208ENST00000540447 TNFRSF25Q93038 417 aa8.8□□□□□ -1
YBX3-208ENST00000540447 FAM193BQ96PV7 902 aaPredicted RBP8.8□□□□□ -1
YBX3-208ENST00000540447 SPON2Q9BUD6 331 aa8.8□□□□□ -1
YBX3-208ENST00000540447 BEX2Q9BXY8 128 aa8.8□□□□□ -1
YBX3-208ENST00000540447 FXYD6Q9H0Q3 95 aa8.8□□□□□ -1
YBX3-208ENST00000540447 DRG1Q9Y295 367 aaKnown RBP8.8□□□□□ -1
YBX3-208ENST00000540447 KRBA1A5PL33 1030 aa8.8□□□□□ -1
YBX3-208ENST00000540447 FOXD2O60548 495 aaPredicted RBP8.8□□□□□ -1
YBX3-208ENST00000540447 VPS26AO75436 327 aa8.8□□□□□ -1
YBX3-208ENST00000540447 PRH1P02810 166 aa8.8□□□□□ -1
YBX3-208ENST00000540447 HOXB6P17509 224 aaKnown RBP8.8□□□□□ -1
YBX3-208ENST00000540447 MZF1P28698 734 aaPredicted RBP8.8□□□□□ -1
YBX3-208ENST00000540447 GEMP55040 296 aa8.8□□□□□ -1
YBX3-208ENST00000540447 AADACL4Q5VUY2 407 aa8.8□□□□□ -1
YBX3-208ENST00000540447 GCNT7Q6ZNI0 430 aa8.8□□□□□ -1
YBX3-208ENST00000540447 PLEKHG7Q6ZR37 379 aa8.8□□□□□ -1
YBX3-208ENST00000540447 ATXN3LQ9H3M9 355 aa8.8□□□□□ -1
YBX3-208ENST00000540447 TAS2R9Q9NYW1 312 aa8.8□□□□□ -1
YBX3-208ENST00000540447 POLR3HQ9Y535 204 aaPredicted RBP8.8□□□□□ -1
YBX3-208ENST00000540447 GRIN2AQ12879 1464 aa8.79□□□□□ -1
YBX3-208ENST00000540447 E9PAM4 449 aa8.79□□□□□ -1
YBX3-208ENST00000540447 WRBO00258 174 aa8.79□□□□□ -1
YBX3-208ENST00000540447 OIP5O43482 229 aa8.79□□□□□ -1
YBX3-208ENST00000540447 RP2O75695 350 aa8.79□□□□□ -1
YBX3-208ENST00000540447 RAB3BP20337 219 aa8.79□□□□□ -1
YBX3-208ENST00000540447 MGAT1P26572 445 aa8.79□□□□□ -1
YBX3-208ENST00000540447 PDHA2P29803 388 aa8.79□□□□□ -1
YBX3-208ENST00000540447 CDK8P49336 464 aa8.79□□□□□ -1
YBX3-208ENST00000540447 PLK1P53350 603 aa8.79□□□□□ -1
YBX3-208ENST00000540447 TAGLNQ01995 201 aaKnown RBP8.79□□□□□ -1
YBX3-208ENST00000540447 ZRANB3Q5FWF4 1079 aa8.79□□□□□ -1
YBX3-208ENST00000540447 C10orf53Q8N6V4 93 aa8.79□□□□□ -1
YBX3-208ENST00000540447 COLGALT1Q8NBJ5 622 aa8.79□□□□□ -1
YBX3-208ENST00000540447 PANX3Q96QZ0 392 aa8.79□□□□□ -1
YBX3-208ENST00000540447 DPCDQ9BVM2 203 aaPredicted RBP8.79□□□□□ -1
YBX3-208ENST00000540447 TAS2R7Q9NYW3 318 aa8.79□□□□□ -1
YBX3-208ENST00000540447 AAR2Q9Y312 384 aaKnown RBP8.79□□□□□ -1
YBX3-208ENST00000540447 ZNF609O15014 1411 aa8.79□□□□□ -1
YBX3-208ENST00000540447 SHANK2Q9UPX8 1470 aa8.79□□□□□ -1
YBX3-208ENST00000540447 TEX51A0A1B0GUA7 166 aa8.79□□□□□ -1
YBX3-208ENST00000540447 ASB14A6NK59 587 aa8.79□□□□□ -1
YBX3-208ENST00000540447 UBXN8O00124 270 aa8.79□□□□□ -1
YBX3-208ENST00000540447 PMPCBO75439 489 aa8.79□□□□□ -1
YBX3-208ENST00000540447 ERN1O75460 977 aaKnown RBP8.79□□□□□ -1
YBX3-208ENST00000540447 GDF11O95390 407 aa8.79□□□□□ -1
YBX3-208ENST00000540447 KELP23276 732 aa8.79□□□□□ -1
YBX3-208ENST00000540447 TMBIM6P55061 237 aa8.79□□□□□ -1
YBX3-208ENST00000540447 PEX6Q13608 980 aa8.79□□□□□ -1
YBX3-208ENST00000540447 CYP20A1Q6UW02 462 aa8.79□□□□□ -1
YBX3-208ENST00000540447 ZYG11AQ6WRX3 759 aa8.79□□□□□ -1
YBX3-208ENST00000540447 ZNF621Q6ZSS3 439 aa8.79□□□□□ -1
YBX3-208ENST00000540447 FBXO39Q8N4B4 442 aa8.79□□□□□ -1
YBX3-208ENST00000540447 WDSUB1Q8N9V3 476 aa8.79□□□□□ -1
YBX3-208ENST00000540447 ZFP28Q8NHY6 868 aa8.79□□□□□ -1
YBX3-208ENST00000540447 FOPNLQ96NB1 174 aa8.79□□□□□ -1
YBX3-208ENST00000540447 PPIL3Q9H2H8 161 aaKnown RBP8.79□□□□□ -1
YBX3-208ENST00000540447 ZMAT5Q9UDW3 170 aaKnown RBP8.79□□□□□ -1
YBX3-208ENST00000540447 FARSAQ9Y285 508 aaKnown RBP8.79□□□□□ -1
YBX3-208ENST00000540447 LYVE1Q9Y5Y7 322 aa8.79□□□□□ -1
YBX3-208ENST00000540447 TSTD3H0UI37 97 aa8.79□□□□□ -1
YBX3-208ENST00000540447 SEC22BO75396 215 aa8.79□□□□□ -1
YBX3-208ENST00000540447 C8BP07358 591 aa8.79□□□□□ -1
YBX3-208ENST00000540447 CTSKP43235 329 aa8.79□□□□□ -1
YBX3-208ENST00000540447 TSPAN5P62079 268 aa8.79□□□□□ -1
YBX3-208ENST00000540447 MPP7Q5T2T1 576 aa8.79□□□□□ -1
YBX3-208ENST00000540447 INTS11Q5TA45 600 aaKnown RBP8.79□□□□□ -1
YBX3-208ENST00000540447 ZZZ3Q8IYH5 903 aa8.79□□□□□ -1
YBX3-208ENST00000540447 OR56A4Q8NGH8 313 aa8.79□□□□□ -1
YBX3-208ENST00000540447 KLHL5Q96PQ7 755 aa8.79□□□□□ -1
YBX3-208ENST00000540447 ITM2CQ9NQX7 267 aa8.79□□□□□ -1
YBX3-208ENST00000540447 KBTBD4Q9NVX7 518 aa8.79□□□□□ -1
YBX3-208ENST00000540447 MTMR10Q9NXD2 777 aa8.79□□□□□ -1
YBX3-208ENST00000540447 HCN3Q9P1Z3 774 aa8.79□□□□□ -1
YBX3-208ENST00000540447 PALLDQ8WX93 1383 aa8.79□□□□□ -1
YBX3-208ENST00000540447 FADS2P1A8MWK0 482 aa8.79□□□□□ -1
YBX3-208ENST00000540447 TP73O15350 636 aa8.79□□□□□ -1
YBX3-208ENST00000540447 OR5F1O95221 314 aa8.79□□□□□ -1
YBX3-208ENST00000540447 POLD2P49005 469 aa8.79□□□□□ -1
YBX3-208ENST00000540447 CYP24A1Q07973 514 aa8.79□□□□□ -1
YBX3-208ENST00000540447 DPYSL3Q14195 570 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms