RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 PYROXD1Q8WU10 500 aa14.25□□□□□ -0.13
CD4-208ENST00000538827 HNRNPLLQ8WVV9 542 aaKnown RBP14.25□□□□□ -0.13
CD4-208ENST00000538827 OR8D1Q8WZ84 308 aa14.25□□□□□ -0.13
CD4-208ENST00000538827 EZH1Q92800 747 aaPredicted RBP14.25□□□□□ -0.13
CD4-208ENST00000538827 STAMBPL1Q96FJ0 436 aa14.25□□□□□ -0.13
CD4-208ENST00000538827 TUBGCP5Q96RT8 1024 aa14.25□□□□□ -0.13
CD4-208ENST00000538827 HEPHQ9BQS7 1158 aa14.25□□□□□ -0.13
CD4-208ENST00000538827 VPS37BQ9H9H4 285 aa14.25□□□□□ -0.13
CD4-208ENST00000538827 IL36AQ9UHA7 158 aa14.25□□□□□ -0.13
CD4-208ENST00000538827 SORCS3Q9UPU3 1222 aa14.25□□□□□ -0.13
CD4-208ENST00000538827 PCDHB9Q9Y5E1 797 aa14.25□□□□□ -0.13
CD4-208ENST00000538827 STON1Q9Y6Q2 735 aa14.25□□□□□ -0.13
CD4-208ENST00000538827 NCOR2Q9Y618 2525 aa14.25□□□□□ -0.13
CD4-208ENST00000538827 SOCS5O75159 536 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 PGLSO95336 258 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 KLF8O95600 359 aaPredicted RBP14.24□□□□□ -0.13
CD4-208ENST00000538827 PRKCGP05129 697 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 PIRTP0C851 137 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 GLULP15104 373 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 CD72P21854 359 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 MAGEA3P43357 314 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 NPY2RP49146 381 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 GRM3Q14832 879 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 POM121L1PQ3SYA9 428 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 C2orf27AQ580R0 203 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 UBAP2Q5T6F2 1119 aaKnown RBP14.24□□□□□ -0.13
CD4-208ENST00000538827 GDPD4Q6W3E5 623 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 TRMT10CQ7L0Y3 403 aaKnown RBP14.24□□□□□ -0.13
CD4-208ENST00000538827 PALM2Q8IXS6 379 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 AGGF1Q8N302 714 aaeCLIP14.24□□□□□ -0.13
CD4-208ENST00000538827 KDM1BQ8NB78 822 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 BLOC1S5Q8TDH9 187 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 PTPRN2Q92932 1015 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 ZNF669Q96BR6 464 aaPredicted RBP14.24□□□□□ -0.13
CD4-208ENST00000538827 TTC25Q96NG3 672 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 TRIB3Q96RU7 358 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 WDR83Q9BRX9 315 aaKnown RBP14.24□□□□□ -0.13
CD4-208ENST00000538827 ADGRE3Q9BY15 652 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 ARHGEF3Q9NR81 526 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 HCN2Q9UL51 889 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 WASF2Q9Y6W5 498 aa14.24□□□□□ -0.13
CD4-208ENST00000538827 EP300Q09472 2414 aaPredicted RBP14.24□□□□□ -0.13
CD4-208ENST00000538827 LOC285095A0A1B0GVY8 99 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 SDR42E2A6NKP2 422 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 WASH3PC4AMC7 463 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 LEFTY1O75610 366 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 PDHA1P08559 390 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 HNRNPLP14866 589 aaKnown RBP eCLIP14.23□□□□□ -0.13
CD4-208ENST00000538827 CTPS1P17812 591 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 PGAM1P18669 254 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 HSD17B3P37058 310 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 KIR2DL1P43626 348 aaPredicted RBP14.23□□□□□ -0.13
CD4-208ENST00000538827 PSMD8P48556 350 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 FAM193AP78312 1265 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 PUM1Q14671 1186 aaKnown RBP eCLIP14.23□□□□□ -0.13
CD4-208ENST00000538827 KYNUQ16719 465 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 ARSIQ5FYB1 569 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 DENND5AQ6IQ26 1287 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 SDE2Q6IQ49 451 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 RANBP10Q6VN20 620 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 CACUL1Q86Y37 369 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 IGDCC3Q8IVU1 814 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 PLPP6Q8IY26 295 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 UBALD2Q8IYN6 164 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 MREGQ8N565 214 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 LRRC39Q96DD0 335 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 KLHL32Q96NJ5 620 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 TRIM56Q9BRZ2 755 aaKnown RBP14.23□□□□□ -0.13
CD4-208ENST00000538827 TXLNGYQ9BZA5 131 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 IL22Q9GZX6 179 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 TMEM245Q9H330 911 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 SEMA4AQ9H3S1 761 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 ZC3H7BQ9UGR2 993 aaKnown RBP14.23□□□□□ -0.13
CD4-208ENST00000538827 SUN2Q9UH99 717 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 TEX264Q9Y6I9 313 aa14.23□□□□□ -0.13
CD4-208ENST00000538827 KPNA3O00505 521 aaPredicted RBP14.22□□□□□ -0.13
CD4-208ENST00000538827 MAN2B1O00754 1011 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 NPC1O15118 1278 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 ALOX15BO15296 676 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 RIPK2O43353 540 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 SYNCRIPO60506 623 aaKnown RBP14.22□□□□□ -0.13
CD4-208ENST00000538827 RNF40O75150 1001 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 PRNPP04156 253 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 CTSLP07711 333 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 HOXB2P14652 356 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 XPAP23025 273 aaPredicted RBP14.22□□□□□ -0.13
CD4-208ENST00000538827 GRIA4P48058 902 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 ELAVL3Q14576 367 aaKnown RBP14.22□□□□□ -0.13
CD4-208ENST00000538827 CASP8Q14790 479 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 STARD3Q14849 445 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 SMAD1Q15797 465 aaKnown RBP14.22□□□□□ -0.13
CD4-208ENST00000538827 UAP1Q16222 522 aaPredicted RBP14.22□□□□□ -0.13
CD4-208ENST00000538827 QPCTQ16769 361 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 LRRC73Q5JTD7 316 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 C9orf64Q5T6V5 341 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 TRMT11Q7Z4G4 463 aaKnown RBP14.22□□□□□ -0.13
CD4-208ENST00000538827 DSG4Q86SJ6 1040 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 TXNDC5Q8NBS9 432 aaKnown RBP14.22□□□□□ -0.13
CD4-208ENST00000538827 ZBTB9Q96C00 473 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 SIGLEC10Q96LC7 697 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms