RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 OXNAD1Q96HP4 312 aaPredicted RBP17.37■□□□□ 0.37
CLN6-202ENST00000538696 TUBGCP5Q96RT8 1024 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 FRMD8Q9BZ67 464 aaPredicted RBP17.37■□□□□ 0.37
CLN6-202ENST00000538696 CPEB1Q9BZB8 566 aaKnown RBP17.37■□□□□ 0.37
CLN6-202ENST00000538696 MKRN2Q9H000 416 aaKnown RBP17.37■□□□□ 0.37
CLN6-202ENST00000538696 POLMQ9NP87 494 aaPredicted RBP17.37■□□□□ 0.37
CLN6-202ENST00000538696 SARDHQ9UL12 918 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 PPM1HQ9ULR3 514 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.37■□□□□ 0.37
CLN6-202ENST00000538696 PLXND1Q9Y4D7 1925 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 SYF2O95926 243 aaKnown RBP17.36■□□□□ 0.37
CLN6-202ENST00000538696 MT-CYBP00156 380 aaPredicted RBP17.36■□□□□ 0.37
CLN6-202ENST00000538696 PRNPP04156 253 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 UGT2B4P06133 528 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 C7P10643 843 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 GABRG2P18507 467 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 NDUFV2P19404 249 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 CES1P23141 567 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 MAGEA3P43357 314 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 CCR3P51677 355 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 METAP1P53582 386 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 RAD51Q06609 339 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 TRAF2Q12933 501 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 OLIG2Q13516 323 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 ARSIQ5FYB1 569 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 CEP85LQ5SZL2 805 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 MAMSTRQ6ZN01 415 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 DSG4Q86SJ6 1040 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 IGDCC3Q8IVU1 814 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 KLHDC8BQ8IXV7 354 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 FBXO36Q8NEA4 188 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 TMIEQ8NEW7 156 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 TSTD1Q8NFU3 115 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 SH3GL2Q99962 352 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 XAB2Q9HCS7 855 aaKnown RBP17.36■□□□□ 0.37
CLN6-202ENST00000538696 SPATA6Q9NWH7 488 aaPredicted RBP17.36■□□□□ 0.37
CLN6-202ENST00000538696 CHMP2BQ9UQN3 213 aa17.36■□□□□ 0.37
CLN6-202ENST00000538696 MYLKQ15746 1914 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.35■□□□□ 0.37
CLN6-202ENST00000538696 C1QTNF3-AMACRE9PGA6 284 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 K7ESF4 209 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 PAPSS2O95340 614 aaPredicted RBP17.35■□□□□ 0.37
CLN6-202ENST00000538696 AP2A1O95782 977 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 SERPINF2P08697 491 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 ELK3P41970 407 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 CXCL12P48061 93 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 CDK16Q00536 496 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 BCL2L1Q07817 233 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 CBLBQ13191 982 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 GRM3Q14832 879 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 CST6Q15828 149 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 SLC14A2Q15849 920 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 DNAJC21Q5F1R6 531 aaKnown RBP17.35■□□□□ 0.37
CLN6-202ENST00000538696 KCTD11Q693B1 232 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 KDELC1Q6UW63 502 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 GDPD4Q6W3E5 623 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 CAPN12Q6ZSI9 719 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 TMPRSS6Q8IU80 811 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 CAMK1DQ8IU85 385 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 HMGB4Q8WW32 186 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 ARRDC3Q96B67 414 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 LRIG1Q96JA1 1093 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 MRGPRX1Q96LB2 322 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 TTC25Q96NG3 672 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 TDRD1Q9BXT4 1180 aaKnown RBP17.35■□□□□ 0.37
CLN6-202ENST00000538696 OSBPL1AQ9BXW6 950 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 ATP13A3Q9H7F0 1226 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 PRMT8Q9NR22 394 aaPredicted RBP17.35■□□□□ 0.37
CLN6-202ENST00000538696 UBP1Q9NZI7 540 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 PCDHGC4Q9Y5F7 938 aa17.35■□□□□ 0.37
CLN6-202ENST00000538696 TSPAN11A1L157 253 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 TRAFD1O14545 582 aaPredicted RBP17.34■□□□□ 0.37
CLN6-202ENST00000538696 MID1O15344 667 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 HTRA2O43464 458 aaPredicted RBP17.34■□□□□ 0.37
CLN6-202ENST00000538696 RNASEH1O60930 286 aaKnown RBP17.34■□□□□ 0.37
CLN6-202ENST00000538696 SOCS5O75159 536 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 SUN1O94901 812 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 IL1BP01584 269 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 ABHD2P08910 425 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 SERPINA4P29622 427 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 OAS2P29728 719 aaKnown RBP17.34■□□□□ 0.37
CLN6-202ENST00000538696 GPX6P59796 221 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 IFFO1Q0D2I5 559 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 GPS2Q13227 327 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 PRPSAP1Q14558 356 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 POM121L1PQ3SYA9 428 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 CCDC38Q502W7 563 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 ANO7Q6IWH7 933 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 LRRC8BQ6P9F7 803 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 KIAA1324Q6UXG2 1013 aaKnown RBP17.34■□□□□ 0.37
CLN6-202ENST00000538696 PARS2Q7L3T8 475 aaKnown RBP17.34■□□□□ 0.37
CLN6-202ENST00000538696 RASSF3Q86WH2 238 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 ZSWIM9Q86XI8 627 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 DTWD2Q8NBA8 298 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 MDGA1Q8NFP4 955 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 PYROXD1Q8WU10 500 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 ARL8AQ96BM9 186 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 KLHL32Q96NJ5 620 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 VPS37BQ9H9H4 285 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 PIH1D1Q9NWS0 290 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms