RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 LTA4HP09960 611 aaKnown RBP25.04■■□□□ 1.6
RAB40C-204ENST00000538492 ARSAP15289 507 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 MAGEA11P43364 429 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 GATMP50440 423 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 FAM189BP81408 668 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 PTPRCAPQ14761 206 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 FAM219BQ5XKK7 198 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 TEX26Q8N6G2 289 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 SH3RF2Q8TEC5 729 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 SEMA3CQ99985 751 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 CCSER2Q9H7U1 834 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 TLR8Q9NR97 1041 aaKnown RBP25.04■■□□□ 1.6
RAB40C-204ENST00000538492 CRYL1Q9Y2S2 319 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 COPG1Q9Y678 874 aaKnown RBP25.04■■□□□ 1.6
RAB40C-204ENST00000538492 TLL2Q9Y6L7 1015 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 THSD7BQ9C0I4 1608 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 MROH6A6NGR9 719 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 A8MT66 165 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 SYN3O14994 580 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 LINGO3P0C6S8 592 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 CDKN2DP55273 166 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 CCDC28BQ9BUN5 200 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 TNFRSF12AQ9NP84 129 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 DONSONQ9NYP3 566 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 IL37Q9NZH6 218 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.04■■□□□ 1.6
RAB40C-204ENST00000538492 VWA7Q9Y334 891 aa25.04■■□□□ 1.6
RAB40C-204ENST00000538492 CFLARO15519 480 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 ATXN1LP0C7T5 689 aaKnown RBP25.03■■□□□ 1.6
RAB40C-204ENST00000538492 RAG1P15918 1043 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 MSX2P35548 267 aaPredicted RBP25.03■■□□□ 1.6
RAB40C-204ENST00000538492 LBRQ14739 615 aaKnown RBP25.03■■□□□ 1.6
RAB40C-204ENST00000538492 RSPO2Q6UXX9 243 aaPredicted RBP25.03■■□□□ 1.6
RAB40C-204ENST00000538492 PIM3Q86V86 326 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 CFAP52Q8N1V2 620 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 CDRT15Q96T59 188 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 ZBTB26Q9HCK0 441 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 MUSKO15146 869 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 IPO13O94829 963 aaKnown RBP25.03■■□□□ 1.6
RAB40C-204ENST00000538492 DNAJB13P59910 316 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 SULT2A1Q06520 285 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 SERINC3Q13530 473 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 KLC3Q6P597 504 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 ADGRG6Q86SQ4 1221 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 GABPB2Q8TAK5 448 aaPredicted RBP25.03■■□□□ 1.6
RAB40C-204ENST00000538492 BLOC1S5Q8TDH9 187 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 FATE1Q969F0 183 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 PPP1R12CQ9BZL4 782 aa25.03■■□□□ 1.6
RAB40C-204ENST00000538492 FAM92AA1XBS5 289 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 SDHDO14521 159 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 PAPSS2O95340 614 aaPredicted RBP25.02■■□□□ 1.6
RAB40C-204ENST00000538492 PIRTP0C851 137 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 ENO3P13929 434 aaPredicted RBP25.02■■□□□ 1.6
RAB40C-204ENST00000538492 PBX3P40426 434 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 PFKPQ01813 784 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 GPR158Q5T848 1215 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 TMEM207Q6UWW9 146 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 C16orf89Q6UX73 402 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 RNF19BQ6ZMZ0 732 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 ABI1Q8IZP0 508 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 RNF148Q8N7C7 305 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 TBATAQ96M53 351 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 ARL5AQ9Y689 179 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 SLC7A4O43246 635 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 LDB2O43679 373 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 S1PR4O95977 384 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 IL10RBQ08334 325 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 NADSYN1Q6IA69 706 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 GIPC2Q8TF65 315 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 USP13Q92995 863 aaPredicted RBP25.02■■□□□ 1.6
RAB40C-204ENST00000538492 TSPAN17Q96FV3 270 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 UBXN10Q96LJ8 280 aa25.02■■□□□ 1.6
RAB40C-204ENST00000538492 MTMR11A4FU01 709 aa25.01■■□□□ 1.6
RAB40C-204ENST00000538492 NT5C1B-RDH14C9J2C7 533 aa25.01■■□□□ 1.6
RAB40C-204ENST00000538492 SLC4A1P02730 911 aa25.01■■□□□ 1.6
RAB40C-204ENST00000538492 UBTFL6P0CB48 400 aaPredicted RBP25.01■■□□□ 1.6
RAB40C-204ENST00000538492 THOP1P52888 689 aa25.01■■□□□ 1.6
RAB40C-204ENST00000538492 PKNOX1P55347 436 aa25.01■■□□□ 1.6
RAB40C-204ENST00000538492 GALNT3Q14435 633 aa25.01■■□□□ 1.6
RAB40C-204ENST00000538492 IFT43Q96FT9 208 aa25.01■■□□□ 1.6
RAB40C-204ENST00000538492 MFSD1Q9H3U5 465 aa25.01■■□□□ 1.6
RAB40C-204ENST00000538492 ALG9Q9H6U8 611 aa25.01■■□□□ 1.6
RAB40C-204ENST00000538492 OLA1Q9NTK5 396 aaKnown RBP25.01■■□□□ 1.6
RAB40C-204ENST00000538492 ACTL7AQ9Y615 435 aa25.01■■□□□ 1.6
RAB40C-204ENST00000538492 TRPC5OSA6NMA1 111 aa25.01■■□□□ 1.59
RAB40C-204ENST00000538492 DRGXA6NNA5 263 aa25.01■■□□□ 1.59
RAB40C-204ENST00000538492 PEX2P28328 305 aa25.01■■□□□ 1.59
RAB40C-204ENST00000538492 MRPL58Q14197 206 aaKnown RBP25.01■■□□□ 1.59
RAB40C-204ENST00000538492 SDCCAG8Q86SQ7 713 aaPredicted RBP25.01■■□□□ 1.59
RAB40C-204ENST00000538492 KBTBD6Q86V97 674 aa25.01■■□□□ 1.59
RAB40C-204ENST00000538492 LOC285095A0A1B0GVY8 99 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 RTN3O95197 1032 aaPredicted RBP25■■□□□ 1.59
RAB40C-204ENST00000538492 TSPAN8P19075 237 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 KCNC1P48547 511 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 KCNQ1P51787 676 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 DUSP4Q13115 394 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 PARP15Q460N3 678 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 BNC2Q6ZN30 1099 aaPredicted RBP25■■□□□ 1.59
RAB40C-204ENST00000538492 MAELQ96JY0 434 aaKnown RBP25■■□□□ 1.59
RAB40C-204ENST00000538492 POLR1EQ9GZS1 481 aaKnown RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms