RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 PTCD2Q8WV60 388 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ZNF669Q96BR6 464 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 LRIG1Q96JA1 1093 aa10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MRGPRX3Q96LB0 322 aa10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TDRD1Q9BXT4 1180 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CPEB1Q9BZB8 566 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CDC42EP4Q9H3Q1 356 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CENPHQ9H3R5 247 aa10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MFSD1Q9H3U5 465 aa10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MTG2Q9H4K7 406 aa10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FBRSL1Q9HCM7 1045 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ZDHHC4Q9NPG8 344 aa10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SYBUQ9NX95 663 aa10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 HACD3Q9P035 362 aa10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TXNDC16Q9P2K2 825 aa10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PHTF1Q9UMS5 762 aa10.74□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MYO10Q9HD67 2058 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 LOC285095A0A1B0GVY8 99 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TLDC2A0PJX2 215 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 WASH3PC4AMC7 463 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SPAG6O75602 509 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 LEFTY1O75610 366 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PGLSO95336 258 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TTC4O95801 387 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 IVLP07476 585 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 GSTA2P09210 222 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ACADMP11310 421 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 HOXB2P14652 356 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 HNRNPLP14866 589 aaKnown RBP eCLIP10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 H2AFXP16104 143 aaPredicted RBP10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PGAM1P18669 254 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CR2P20023 1033 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CD72P21854 359 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 IL12RB1P42701 662 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CHRNA4P43681 627 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PSMD8P48556 350 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 RPL26P61254 145 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CRADDP78560 199 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PDE1BQ01064 536 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TRAF2Q12933 501 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 THOC5Q13769 683 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ELAVL3Q14576 367 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TMEM196Q5HYL7 178 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 BEND6Q5SZJ8 279 aaPredicted RBP10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ALG1LQ6GMV1 187 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FSTL4Q6MZW2 842 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ERAP2Q6P179 960 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TXNDC11Q6PKC3 985 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 RANBP10Q6VN20 620 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 USP45Q70EL2 814 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 GLT6D1Q7Z4J2 308 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MMAAQ8IVH4 418 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CTAGE3PQ8IX95 158 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 UBALD2Q8IYN6 164 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PHTF2Q8N3S3 785 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TXNDC5Q8NBS9 432 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 OR2A12Q8NGT7 310 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CDKL2Q92772 493 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 HS3ST6Q96QI5 342 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 NELL2Q99435 816 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 EBNA1BP2Q99848 306 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PHACTR1Q9C0D0 580 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PABPC3Q9H361 631 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SEMA4AQ9H3S1 761 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ARHGEF3Q9NR81 526 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 WNT16Q9UBV4 365 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 RPL26L1Q9UNX3 145 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 NCKAP1Q9Y2A7 1128 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 STARD13Q9Y3M8 1113 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PKP3Q9Y446 797 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 RPS6KL1Q9Y6S9 549 aa10.73□□□□□ -0.69
TNFRSF1A-211ENST00000538363 COL4A2P08572 1712 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SPTBN5Q9NRC6 3674 aaKnown RBP10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SMIM23A6NLE4 172 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 A8MX80 341 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ANKRD66B4E2M5 251 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 K7EQS6 105 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 STX7O15400 261 aaKnown RBP10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ATG13O75143 517 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 RNF40O75150 1001 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 DNTTP04053 509 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PIRTP0C851 137 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PRKCHP24723 683 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ECHS1P30084 290 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SLC8A1P32418 973 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 STX2P32856 288 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ADRA1AP35348 466 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 HSD17B3P37058 310 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 GRIA4P48058 902 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PRAMEP78395 509 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TMPRSS15P98073 1019 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MESP2Q0VG99 397 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CASP8Q14790 479 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 UAP1Q16222 522 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MSS51Q4VC12 460 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 HSP90B2PQ58FF3 399 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ZNF805Q5CZA5 627 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TJAP1Q5JTD0 557 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SPANXN3Q5MJ09 141 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms