RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 COX16Q9P0S2 106 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 CTTNBP2NLQ9P2B4 639 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 CFAP97Q9P2B7 532 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 IGSF9Q9P2J2 1179 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 EPS15L1Q9UBC2 864 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 CNOT8Q9UFF9 292 aaKnown RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 RASAL2Q9UJF2 1139 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 LSM7Q9UK45 103 aaKnown RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 INTUQ9ULD6 942 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 ARHGAP26Q9UNA1 814 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 NAALADL1Q9UQQ1 740 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 PPP2R2CQ9Y2T4 447 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 SH3BP1Q9Y3L3 701 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 HBS1LQ9Y450 684 aaKnown RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 CPQQ9Y646 472 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 EPN1Q9Y6I3 576 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 HELZP42694 1942 aaKnown RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 LAMA3Q16787 3333 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 DENND4CQ5VZ89 1909 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 CHD9Q3L8U1 2897 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 BRWD1Q9NSI6 2320 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 NUP210Q8TEM1 1887 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 SIGLEC16A6NMB1 481 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 HEPACAM2A8MVW5 462 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 EIF3CLB5ME19 914 aaKnown RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 M0QYT0 321 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 MYO1FO00160 1098 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 ZNF263O14978 683 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 MDM4O15151 490 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 MSI1O43347 362 aaKnown RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 DNAJC6O75061 913 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 MOSPD3O75425 235 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 ECI2O75521 394 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 RNF8O76064 485 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 PRAMEF12O95522 483 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 OLFM2O95897 454 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 TRUB2O95900 331 aaKnown RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 TBX18O95935 607 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 F9P00740 461 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 CYP1A2P05177 515 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 HMBSP08397 361 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 CCDC175P0C221 793 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 IRF1P10914 325 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 PSMC3P17980 439 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 GPD1P21695 349 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 PSMA2P25787 234 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 OAS2P29728 719 aaKnown RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 MC4RP32245 332 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 CCR1P32246 355 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 RDXP35241 583 aaKnown RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 RFC1P35251 1148 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 VIPR2P41587 438 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 MAGEA1P43355 309 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 SLC11A2P49281 568 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 FNTBP49356 437 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 PGFP49763 221 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 SULT1E1P49888 294 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 GALCP54803 685 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 NAP1L1P55209 391 aaKnown RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 TBX4P57082 545 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 TUBB4BP68371 445 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 NFKB2Q00653 900 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 OCRLQ01968 901 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 DEUP1Q05D60 604 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 PTP4A2Q12974 167 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 FZD5Q13467 585 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 HTR4Q13639 388 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 PIGHQ14442 188 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 MTF1Q14872 753 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 BRD3Q15059 726 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 DHCR24Q15392 516 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 TAF5Q15542 800 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 CDO1Q16878 200 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 ASTE1Q2TB18 679 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 ARL13BQ3SXY8 428 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 SLC25A52Q3SY17 297 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 SYPL2Q5VXT5 272 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 NUGGCQ68CJ6 796 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 PLEKHA7Q6IQ23 1121 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 MSANTD2Q6P1R3 559 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 PARM1Q6UWI2 310 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 BEND5Q7L4P6 421 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 ARCQ7LC44 396 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 BHLHA9Q7RTU4 235 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 TAC4Q86UU9 113 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 C11orf74Q86VG3 221 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 UNC45BQ8IWX7 931 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 RHOT2Q8IXI1 618 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 ZDHHC14Q8IZN3 488 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 DEFB106AQ8N104 65 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 ZNF276Q8N554 614 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 EMC1Q8N766 993 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 TXNDC5Q8NBS9 432 aaKnown RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 OLIG1Q8TAK6 271 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 CALML6Q8TD86 181 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 BPIFB1Q8TDL5 484 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 DQX1Q8TE96 717 aaKnown RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 DEPDC1BQ8WUY9 529 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms