RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 TBX18O95935 607 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 HOXC4P09017 264 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 GSTA2P09210 222 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ZNF883P0CG24 379 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 TIE1P35590 1138 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 GARSP41250 739 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 RABIFP47224 123 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 NPY2RP49146 381 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 TAGLNQ01995 201 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SEMA3BQ13214 749 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 EIF4EBP2Q13542 120 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ITGA9Q13797 1035 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ZNF234Q14588 700 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 TMED2Q15363 201 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CST6Q15828 149 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 KIAA0895LQ68EN5 471 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 LRRC8EQ6NSJ5 796 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 FOXR1Q6PIV2 292 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SLC30A9Q6PML9 568 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 BHLHA9Q7RTU4 235 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SPRED2Q7Z698 418 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 MILR1Q7Z6M3 343 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 REXO1L1PQ8IX06 675 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 MPP5Q8N3R9 675 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 BEND7Q8N7W2 519 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 TXNDC5Q8NBS9 432 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 RPLP0P6Q8NHW5 317 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 PPP1R14BQ96C90 147 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 PRICKLE1Q96MT3 831 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 QKIQ96PU8 341 aaKnown RBP eCLIP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 DUSP15Q9H1R2 295 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 MRPL46Q9H2W6 279 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 EPB41L1Q9H4G0 881 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SUV39H2Q9H5I1 410 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ITM2CQ9NQX7 267 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 EIF2B3Q9NR50 452 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SEPT10Q9P0V9 454 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SAMD15Q9P1V8 674 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 VPS51Q9UID3 782 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SLC6A14Q9UN76 642 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ZNF148Q9UQR1 794 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 NOSIPQ9Y314 301 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 PKP3Q9Y446 797 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 NME7Q9Y5B8 376 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SAR1BQ9Y6B6 198 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ANK1P16157 1881 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 TSPAN11A1L157 253 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 PROB1E7EW31 1015 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 NDUFAB1O14561 156 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 KCNK3O14649 394 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 MUSKO15146 869 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 EIF3HO15372 352 aaKnown RBP eCLIP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CST8O60676 142 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 EPN2O95208 641 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SEMA4FO95754 770 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 NDST3O95803 873 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 IL1BP01584 269 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 FYNP06241 537 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 VIMP08670 466 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ALPIP09923 528 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CD27P26842 260 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SLC8A1P32418 973 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ZBTB17Q13105 803 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SLC14A1Q13336 389 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 MTM1Q13496 603 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 DPYSQ14117 519 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ANGPT1Q15389 498 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SKIDA1Q1XH10 827 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 C15orf59Q2T9L4 293 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 WLSQ5T9L3 541 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 RNF187Q5TA31 235 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 FBXO38Q6PIJ6 1188 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 C16orf54Q6UWD8 224 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 TMPRSS6Q8IU80 811 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SYT12Q8IV01 421 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 STK40Q8N2I9 435 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 PIP4K2CQ8TBX8 421 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ACTRT1Q8TDG2 376 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 HTR3CQ8WXA8 447 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 STON2Q8WXE9 905 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 MAML1Q92585 1016 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 LRRC39Q96DD0 335 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ZC3H10Q96K80 434 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ALPK1Q96QP1 1244 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 KCTD15Q96SI1 283 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CHP1Q99653 195 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 GORASP1Q9BQQ3 440 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 DUSP23Q9BVJ7 150 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 COL25A1Q9BXS0 654 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 NDFIP2Q9NV92 336 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 RBM22Q9NW64 420 aaKnown RBP eCLIP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SCHIP1Q9P0W5 487 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 NFKBIL1Q9UBC1 381 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CYTH4Q9UIA0 394 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 MKL2Q9ULH7 1088 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CARD8Q9Y2G2 431 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 TTLL3Q9Y4R7 772 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 DNMT3AQ9Y6K1 912 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SCN1AP35498 2009 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TSC2P49815 1807 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms