RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 CSPG5O95196 566 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 LRPAP1P30533 357 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 SCNN1BP51168 640 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 SLC12A2P55011 1212 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 PRKCQQ04759 706 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 TMEM62Q0P6H9 643 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 RALGDSQ12967 914 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 MAP7D1Q3KQU3 841 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 SPRYD7Q5W111 196 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 KIAA0408Q6ZU52 694 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 CUZD1Q86UP6 607 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 GPR180Q86V85 440 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 OSTM1Q86WC4 334 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 SLC22A9Q8IVM8 553 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 CEP97Q8IW35 865 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 SMYD1Q8NB12 490 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 PCYOX1LQ8NBM8 494 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 ZNF420Q8TAQ5 688 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-218ENST00000537641 HEXDCQ8WVB3 486 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 ABTB1Q969K4 478 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-218ENST00000537641 FCRL5Q96RD9 977 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 CIB1Q99828 191 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 TRMOQ9BU70 441 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 IGSF5Q9NSI5 407 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 GINS2Q9Y248 185 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 TCAF1Q9Y4C2 921 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 DOCK3Q8IZD9 2030 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 ZNF839A8K0R7 811 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 SPTLC1O15269 473 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 DYNC1LI2O43237 492 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-218ENST00000537641 HUS1O60921 280 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 ANXA9O76027 345 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 RECQL4O94761 1208 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 F9P00740 461 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 RBP1P09455 135 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 HMOX2P30519 316 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 SLC1A2P43004 574 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 MAGEA8P43361 318 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 ARCN1P48444 511 aaKnown RBP12.23□□□□□ -0.45
CPSF7-218ENST00000537641 GEMP55040 296 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 DAOAP59103 153 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 TAS2R39P59534 338 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 STX1BP61266 288 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 BNIP2Q12982 314 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 INPP5AQ14642 412 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 FAM83EQ2M2I3 478 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 SPATS1Q496A3 300 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 AGAP9Q5VTM2 703 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 CLEC20AQ6ZU45 233 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 PATL1Q86TB9 770 aaKnown RBP12.23□□□□□ -0.45
CPSF7-218ENST00000537641 CAMK1DQ8IU85 385 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 MFSD6LQ8IWD5 586 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 COLGALT2Q8IYK4 626 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 FAM47BQ8NA70 645 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 RNF169Q8NCN4 708 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 GABPB2Q8TAK5 448 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-218ENST00000537641 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.23□□□□□ -0.45
CPSF7-218ENST00000537641 PPWD1Q96BP3 646 aaKnown RBP12.23□□□□□ -0.45
CPSF7-218ENST00000537641 ISOC1Q96CN7 298 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 SLC45A3Q96JT2 553 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 OSMRQ99650 979 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 C9orf16Q9BUW7 83 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 PRKD2Q9BZL6 878 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 HIPK3Q9H422 1215 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 NOL11Q9H8H0 719 aaKnown RBP12.23□□□□□ -0.45
CPSF7-218ENST00000537641 CDHR5Q9HBB8 845 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 CCM2LQ9NUG4 571 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-218ENST00000537641 GJD2Q9UKL4 321 aa12.23□□□□□ -0.45
CPSF7-218ENST00000537641 A8MT66 165 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 PLOD2O00469 737 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 SOCS2O14508 198 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 AKAP10O43572 662 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 CBFA2T3O75081 653 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 IPO13O94829 963 aaKnown RBP12.22□□□□□ -0.45
CPSF7-218ENST00000537641 JCHAINP01591 159 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 FYNP06241 537 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 CPB1P15086 417 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 CLCN5P51795 746 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 SLC7A2P52569 658 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 ATP6V0D1P61421 351 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 ZNF460Q14592 562 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 MFSD10Q14728 455 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 XKR4Q5GH76 650 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 LCN8Q6JVE9 175 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 HFE2Q6ZVN8 426 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 PTAR1Q7Z6K3 402 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-218ENST00000537641 CLVS1Q8IUQ0 354 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-218ENST00000537641 DENND6AQ8IWF6 608 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 TSPAN17Q96FV3 270 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 DOK1Q99704 481 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 PTPN18Q99952 460 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 OMDQ99983 421 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 HOPXQ9BPY8 73 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-218ENST00000537641 GPATCH1Q9BRR8 931 aaKnown RBP12.22□□□□□ -0.45
CPSF7-218ENST00000537641 ULBP1Q9BZM6 244 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 MUC13Q9H3R2 512 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 NXF3Q9H4D5 531 aaKnown RBP12.22□□□□□ -0.45
CPSF7-218ENST00000537641 CD320Q9NPF0 282 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 ANLNQ9NQW6 1124 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 CNGB3Q9NQW8 809 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms