RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 MPSTP25325 297 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 POLD2P49005 469 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SPIRE1Q08AE8 756 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 DNAJC14Q6Y2X3 702 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 EFL1Q7Z2Z2 1120 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 IKZF4Q9H2S9 585 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 MID1IP1Q9NPA3 183 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 DPP3Q9NY33 737 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF222Q9UK12 451 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ANKRD34BA5PLL1 514 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 FOXD2O60548 495 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ADAM23O75077 832 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 FDX1P10109 184 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 CYP4B1P13584 511 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 CRKP46108 304 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 YAP1P46937 504 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 OLR1P78380 273 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 C19orf57Q0VDD7 668 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 KLHL12Q53G59 568 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 XKR5Q6UX68 686 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 IFNLR1Q8IU57 520 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SP8Q8IXZ3 490 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 CLYBLQ8N0X4 340 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 RNF149Q8NC42 400 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ANKK1Q8NFD2 765 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 TRIB2Q92519 343 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 TFAP2CQ92754 450 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ZUFSPQ96AP4 578 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 FAM120BQ96EK7 910 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 FICDQ9BVA6 458 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 RHOBTB2Q9BYZ6 727 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 TM9SF3Q9HD45 589 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 FBXO8Q9NRD0 319 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 MKLN1Q9UL63 735 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ZNRF3Q9ULT6 936 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 EIF3LQ9Y262 564 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 MTF2Q9Y483 593 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 DAGLAQ9Y4D2 1042 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 DHRS12A0PJE2 317 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 EFCAB10A6NFE3 127 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 H0Y858 1186 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 DGAT1O75907 488 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 PCSK6P29122 969 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 NUMBP49757 651 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 BMXP51813 675 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SLC7A2P52569 658 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 RAB25P57735 213 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 TMEM62Q0P6H9 643 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 IL18R1Q13478 541 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ECM1Q16610 540 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 TEX44Q53QW1 395 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ANKRD22Q5VYY1 191 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF598Q86UK7 904 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 LRRC71Q8N4P6 559 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ADAM32Q8TC27 787 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF486Q96H40 463 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 CPXM1Q96SM3 734 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 TBCBQ99426 244 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 OMDQ99983 421 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 COA1Q9GZY4 146 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 RPF2Q9H7B2 306 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SMPD3Q9NY59 655 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 FAM8A1Q9UBU6 413 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 FBXO40Q9UH90 709 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 FEM1BQ9UK73 627 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 NUP50Q9UKX7 468 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 RNF112Q9ULX5 631 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 CCDC154A6NI56 674 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 H3BMQ9 156 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 GPR25O00155 361 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 HUS1O60921 280 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CYP3A4P08684 503 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 RRM2P31350 389 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 MAGEA6P43360 314 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 PLK1P53350 603 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 SRP54P61011 504 aaKnown RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CYP4F2P78329 520 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 TNK2Q07912 1038 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CYP4F3Q08477 520 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 DNASE1L3Q13609 305 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 PPP2R2DQ66LE6 453 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 FBXL19Q6PCT2 694 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 ILDR2Q71H61 639 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 BPHLQ86WA6 291 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 METTL23Q86XA0 190 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CPNE8Q86YQ8 564 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 KIF12Q96FN5 646 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 COG8Q96MW5 612 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 TBCDQ9BTW9 1192 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 MTMR12Q9C0I1 747 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CAB39LQ9H9S4 337 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 SLC38A7Q9NVC3 462 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 ATPIF1Q9UII2 106 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 RAP2CQ9Y3L5 183 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 RWDD3Q9Y3V2 267 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 NRP2O60462 931 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 HMGCRP04035 888 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 ARP10275 920 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF26P17031 533 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms