RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PTAR1Q7Z6K3 402 aaPredicted RBP18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 SYCE1Q8N0S2 351 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 EID2Q8N6I1 236 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 DENND6BQ8NEG7 585 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 TRIM44Q96DX7 344 aaPredicted RBP18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 ZNF641Q96N77 438 aaPredicted RBP18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 ZNF599Q96NL3 588 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 PSKH2Q96QS6 385 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 RCOR3Q9P2K3 495 aaPredicted RBP18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 FTSJ1Q9UET6 329 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 MSRB2Q9Y3D2 182 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 LRP4O75096 1905 aa18.02■□□□□ 0.48
TNFRSF1A-209ENST00000536717 ASXL3Q9C0F0 2248 aa18.02■□□□□ 0.48
TNFRSF1A-209ENST00000536717 DMXL2Q8TDJ6 3036 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 GOLGA8CPA6NN73 597 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 MAFKO60675 156 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 MMP20O60882 483 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 KRT7P08729 469 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 SERPINB6P35237 376 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 GJC1P36383 396 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 DPYSL3Q14195 570 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 TMEM52BQ4KMG9 183 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 TMCO4Q5TGY1 634 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 UNQ6494/PRO21346Q6UXR6 183 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 CENPTQ96BT3 561 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 GOLPH3Q9H4A6 298 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 SEPT3Q9UH03 358 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PYCARDQ9ULZ3 195 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 HYOU1Q9Y4L1 999 aa18.02■□□□□ 0.47
TNFRSF1A-209ENST00000536717 GRID2IPA4D2P6 1211 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 FPGTO14772 594 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 TM7SF2O76062 418 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 SUOXP51687 545 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ELP6Q0PNE2 266 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 TPRG1LQ5T0D9 272 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ZFYVE27Q5T4F4 411 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 BRAT1Q6PJG6 821 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 RHOT1Q8IXI2 618 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 SLC25A45Q8N413 288 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 CXorf40AQ8TE69 158 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ECHDC3Q96DC8 303 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ALS2CR12Q96Q35 445 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 WRAP53Q9BUR4 548 aaKnown RBP18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ATP13A3Q9H7F0 1226 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PCDH12Q9NPG4 1184 aa18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 TRMT1Q9NXH9 659 aaKnown RBP18.01■□□□□ 0.47
TNFRSF1A-209ENST00000536717 SPTY2D1-AS1A0A0U1RR47 76 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 GOLGA6L9A6NEM1 432 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 TRAFD1O14545 582 aaPredicted RBP18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 RIOK3O14730 519 aaKnown RBP18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 CR2P20023 1033 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 XPAP23025 273 aaPredicted RBP18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 SERPINA4P29622 427 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 IGFALSP35858 605 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 RABIFP47224 123 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 SCNN1BP51168 640 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PFN3P60673 137 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 DNAJC3Q13217 504 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 FZD2Q14332 565 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 NCBP2-AS2Q69YL0 99 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 DCP2Q8IU60 420 aaKnown RBP18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 REXO1L1PQ8IX06 675 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PGBD5Q8N414 524 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ATPAF2Q8N5M1 289 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 LRRC57Q8N9N7 239 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PCDH19Q8TAB3 1148 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 IFT43Q96FT9 208 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 CNDP2Q96KP4 475 aaKnown RBP18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 UCKL1Q9NWZ5 548 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 COQ6Q9Y2Z9 468 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 CAPN6Q9Y6Q1 641 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ACACAQ13085 2346 aa18■□□□□ 0.47
TNFRSF1A-209ENST00000536717 TTC24A2A3L6 582 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ENC1O14682 589 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PSTPIP1O43586 416 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 MFSD11O43934 449 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 LDOC1O95751 146 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PRKCGP05129 697 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 TNNT1P13805 278 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 DGKAP23743 735 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 RENBPP51606 427 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 SEMG2Q02383 582 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 BCL2L1Q07817 233 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ZNF235Q14590 738 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 HS1BP3Q53T59 392 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ODF2Q5BJF6 829 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ZNF542PQ5EBM4 170 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 CFAP58Q5T655 872 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 LRRC38Q5VT99 294 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PEX26Q7Z412 305 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 TP53I13Q8NBR0 393 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ZNF670Q9BS34 389 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 MBNL1Q9NR56 388 aaKnown RBP17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 AMFRQ9UKV5 643 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ATP8A1Q9Y2Q0 1164 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 RP1P56715 2156 aa17.99■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ZZEF1O43149 2961 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PIAS2O75928 621 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PROS1P07225 676 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms