RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 HGFP14210 728 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 TIMP2P16035 220 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 GPD1P21695 349 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 MMP8P22894 467 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 KELP23276 732 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CCKBRP32239 447 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 YBEYP58557 167 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 BIRC2Q13490 618 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 MTM1Q13496 603 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ARHGEF7Q14155 803 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 INPP5AQ14642 412 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 MAP9Q49MG5 647 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 TMEM52BQ4KMG9 183 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 MIIPQ5JXC2 388 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 XKR5Q6UX68 686 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 TAF8Q7Z7C8 310 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 RTL3Q8N8U3 475 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 Q8N9G6 341 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 JOSD2Q8TAC2 188 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 SLC20A1Q8WUM9 679 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 HMCESQ96FZ2 354 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CMKLR1Q99788 373 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 SEPT11Q9NVA2 429 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 MOSPD1Q9UJG1 213 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 OR1A2Q9Y585 309 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 B4DGG1 531 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 AGRPO00253 132 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CASC3O15234 703 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 FGF10O15520 208 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ZW10O43264 779 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ITGB2P05107 769 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 SFTPCP11686 197 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 KRT10P13645 584 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ITIH2P19823 946 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ERCC5P28715 1186 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 SERPINA4P29622 427 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 LIG3P49916 1009 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 MAPK10P53779 464 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 HDAC4P56524 1084 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 UGP2Q16851 508 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 WSCD2Q2TBF2 565 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 RAB6CQ53S08 254 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 FKBP15Q5T1M5 1219 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ARTNQ5T4W7 220 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PHF19Q5T6S3 580 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 TMEM164Q5U3C3 297 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 BRAT1Q6PJG6 821 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 NETO2Q8NC67 525 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 FAM46DQ8NEK8 389 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 SLC30A5Q8TAD4 765 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 HCAR2Q8TDS4 363 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 EXTL1Q92935 676 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PDXPQ96GD0 296 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 NAA15Q9BXJ9 866 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ZMYND15Q9H091 742 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 RAB6CQ9H0N0 254 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 SUV39H2Q9H5I1 410 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ATP13A3Q9H7F0 1226 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PCDH12Q9NPG4 1184 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ADAM22Q9P0K1 906 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 RABGEF1Q9UJ41 708 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 NEU3Q9UQ49 428 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ATP8A1Q9Y2Q0 1164 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 MYO18BQ8IUG5 2567 aa13.07□□□□□ -0.32
TNFRSF1A-207ENST00000535958 A0A1W2PQM1 296 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 NVLO15381 856 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 INSIG1O15503 277 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 EFSO43281 561 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CYP1A1P04798 512 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ELFN1P0C7U0 828 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 GLB1P16278 677 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 EEF1GP26641 437 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CSRP3P50461 194 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 TPI1P60174 286 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 TGIF1Q15583 401 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 DNAJC24Q6P3W2 148 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 OR56A4Q8NGH8 313 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 KIAA1524Q8TCG1 905 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PCMTD1Q96MG8 357 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ZNF641Q96N77 438 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 TUBGCP5Q96RT8 1024 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 RBM15Q96T37 977 aaKnown RBP eCLIP13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 TRIM4Q9C037 500 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 DPEP2Q9H4A9 486 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 TAB2Q9NYJ8 693 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 LHX3Q9UBR4 397 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 NOCTQ9UK39 431 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ACSL6Q9UKU0 697 aa13.06□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PRAMEF33A0A0G2JMD5 474 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 TSPAN11A1L157 253 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PDE2AO00408 941 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PRAMEF10O60809 474 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PNLIPP16233 465 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ITIH1P19827 911 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CD82P27701 267 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 SOX5P35711 763 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 MMP12P39900 470 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 STAT1P42224 750 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 AIF1P55008 147 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 KIAA1024LP59773 190 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms