RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ZNF641Q96N77 438 aaPredicted RBP16.52■□□□□ 0.24
ATL3-202ENST00000535789 MGME1Q9BQP7 344 aa16.52■□□□□ 0.24
ATL3-202ENST00000535789 GOLPH3Q9H4A6 298 aa16.52■□□□□ 0.24
ATL3-202ENST00000535789 SEPT3Q9UH03 358 aa16.52■□□□□ 0.24
ATL3-202ENST00000535789 NEMP1O14524 444 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 YKT6O15498 198 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 LCA5LO95447 670 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 ITGAVP06756 1048 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 C6P13671 934 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 SERPINB6P35237 376 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 GARSP41250 739 aaKnown RBP16.51■□□□□ 0.23
ATL3-202ENST00000535789 ARRB1P49407 418 aaPredicted RBP16.51■□□□□ 0.23
ATL3-202ENST00000535789 SCNN1BP51168 640 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 NSUN2Q08J23 767 aaKnown RBP eCLIP16.51■□□□□ 0.23
ATL3-202ENST00000535789 TRAF2Q12933 501 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 SUZ12Q15022 739 aaKnown RBP16.51■□□□□ 0.23
ATL3-202ENST00000535789 TCEAL1Q15170 157 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 IRF4Q15306 451 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 ZNF542PQ5EBM4 170 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 ZSCAN30Q86W11 494 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 MARCH9Q86YJ5 346 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 PLD5Q8N7P1 536 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 HCAR2Q8TDS4 363 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 FUBP1Q96AE4 644 aaKnown RBP16.51■□□□□ 0.23
ATL3-202ENST00000535789 NUDCD1Q96RS6 583 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 ATP13A3Q9H7F0 1226 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 PYCARDQ9ULZ3 195 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 ATP8A1Q9Y2Q0 1164 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 NEUROG3Q9Y4Z2 214 aa16.51■□□□□ 0.23
ATL3-202ENST00000535789 SPTY2D1-AS1A0A0U1RR47 76 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 FAM221BA6H8Z2 402 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 GOLGA8CPA6NN73 597 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 TRIM38O00635 465 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 HTRA2O43464 458 aaPredicted RBP16.5■□□□□ 0.23
ATL3-202ENST00000535789 TNFSF14O43557 240 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 NRDCO43847 1150 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 MAGEC1O60732 1142 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 PIAS2O75928 621 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 TM7SF2O76062 418 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 KDELR1P24390 212 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 SERPINA4P29622 427 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 CLDN6P56747 220 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 AP1S1P61966 158 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 EIF2B5Q13144 721 aaKnown RBP16.5■□□□□ 0.23
ATL3-202ENST00000535789 ZNF235Q14590 738 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 GRM3Q14832 879 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 PDK2Q15119 407 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 PTPRRQ15256 657 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 KCTD16Q68DU8 428 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 BRAT1Q6PJG6 821 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 RHOT2Q8IXI1 618 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 CCDC170Q8IYT3 715 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 TEX26Q8N6G2 289 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 CXorf40AQ8TE69 158 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 MAML1Q92585 1016 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 TRIM44Q96DX7 344 aaPredicted RBP16.5■□□□□ 0.23
ATL3-202ENST00000535789 CDC6Q99741 560 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 TCEAL2Q9H3H9 227 aaPredicted RBP16.5■□□□□ 0.23
ATL3-202ENST00000535789 NOD2Q9HC29 1040 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.5■□□□□ 0.23
ATL3-202ENST00000535789 FTSJ1Q9UET6 329 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 PCDHGC4Q9Y5F7 938 aa16.5■□□□□ 0.23
ATL3-202ENST00000535789 RCCD1A6NED2 376 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 FPGTO14772 594 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 NDUFA10O95299 355 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 TRIM16O95361 564 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 KRT7P08729 469 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 DGKAP23743 735 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 MMP13P45452 471 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 ACADVLP49748 655 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 LIG3P49916 1009 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 BCL2L1Q07817 233 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 ELP6Q0PNE2 266 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 PDE1CQ14123 709 aaPredicted RBP16.49■□□□□ 0.23
ATL3-202ENST00000535789 WSCD2Q2TBF2 565 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 PROX2Q3B8N5 592 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 DPPA4Q7L190 304 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 RBFAQ8N0V3 343 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 PELI3Q8N2H9 469 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 KCTD6Q8NC69 237 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 SPOCK2Q92563 424 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 CNDP2Q96KP4 475 aaKnown RBP16.49■□□□□ 0.23
ATL3-202ENST00000535789 SMIM14Q96QK8 99 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 DTLQ9NZJ0 730 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 SALL4Q9UJQ4 1053 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 INTUQ9ULD6 942 aa16.49■□□□□ 0.23
ATL3-202ENST00000535789 REXO2Q9Y3B8 237 aaKnown RBP16.49■□□□□ 0.23
ATL3-202ENST00000535789 EPN1Q9Y6I3 576 aaPredicted RBP16.49■□□□□ 0.23
ATL3-202ENST00000535789 LY6G6EA0A0G2JKS1 128 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 LRRD1A4D1F6 860 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 ENC1O14682 589 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 NME1P15531 152 aaKnown RBP16.48■□□□□ 0.23
ATL3-202ENST00000535789 CYLC1P35663 651 aaPredicted RBP16.48■□□□□ 0.23
ATL3-202ENST00000535789 ARHGAP25P42331 645 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 RABIFP47224 123 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 MARCKSL1P49006 195 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 SUOXP51687 545 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 SGCGQ13326 291 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 AGERQ15109 404 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 SLC9A4Q6AI14 798 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms