RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 EIF2B5Q13144 721 aaKnown RBP10.47□□□□□ -0.73
CSDE1-217ENST00000534699 EIF3IQ13347 325 aaKnown RBP10.47□□□□□ -0.73
CSDE1-217ENST00000534699 ZNF235Q14590 738 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 IFI16Q16666 785 aaKnown RBP10.47□□□□□ -0.73
CSDE1-217ENST00000534699 SPECC1LQ69YQ0 1117 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 PHLDB2Q86SQ0 1253 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 GATAD2AQ86YP4 633 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 NRSN1Q8IZ57 195 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 WDR92Q96MX6 357 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 CSPG4P5Q96PW8 444 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 PCDH18Q9HCL0 1135 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 SYCE3A1L190 88 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 TRAFD1O14545 582 aaPredicted RBP10.46□□□□□ -0.73
CSDE1-217ENST00000534699 OPA1O60313 960 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 TNFP01375 233 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 RARAP10276 462 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 PRLRP16471 622 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 TSHRP16473 764 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 JUNDP17535 347 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 VIPR1P32241 457 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 TRIM23P36406 574 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 HADHBP55084 474 aaKnown RBP10.46□□□□□ -0.73
CSDE1-217ENST00000534699 UCNP55089 124 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 PPARDQ03181 441 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 GALNT2Q10471 571 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 CCDC122Q5T0U0 273 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 ATXN7L2Q5T6C5 722 aaPredicted RBP10.46□□□□□ -0.73
CSDE1-217ENST00000534699 OGFOD3Q6PK18 319 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 BZW1Q7L1Q6 419 aaKnown RBP10.46□□□□□ -0.73
CSDE1-217ENST00000534699 CBARPQ8N350 705 aaPredicted RBP10.46□□□□□ -0.73
CSDE1-217ENST00000534699 ATPAF2Q8N5M1 289 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 CTNNBL1Q8WYA6 563 aaPredicted RBP10.46□□□□□ -0.73
CSDE1-217ENST00000534699 CCDC97Q96F63 343 aaPredicted RBP10.46□□□□□ -0.73
CSDE1-217ENST00000534699 IL12RB2Q99665 862 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 APOOQ9BUR5 198 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 NUP85Q9BW27 656 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 CDH19Q9H159 772 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 PCDH12Q9NPG4 1184 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 DNAJC28Q9NX36 388 aa10.46□□□□□ -0.73
CSDE1-217ENST00000534699 ADAMTS20P59510 1910 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 MYLKQ15746 1914 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 TRABD2BA6NFA1 517 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 CAPN8A6NHC0 703 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 TK2O00142 265 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 CACNB4O00305 520 aaPredicted RBP10.46□□□□□ -0.74
CSDE1-217ENST00000534699 TRIM38O00635 465 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 KCNK3O14649 394 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 TOP3BO95985 862 aaKnown RBP10.46□□□□□ -0.74
CSDE1-217ENST00000534699 DPTQ07507 201 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 KRT81Q14533 505 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 HES3Q5TGS1 186 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 MARC1Q5VT66 337 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 LAYNQ6UX15 382 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 APOLD1Q96LR9 279 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 MCCC1Q96RQ3 725 aaPredicted RBP10.46□□□□□ -0.74
CSDE1-217ENST00000534699 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.46□□□□□ -0.74
CSDE1-217ENST00000534699 DDX56Q9NY93 547 aaKnown RBP10.46□□□□□ -0.74
CSDE1-217ENST00000534699 PCSK1NQ9UHG2 260 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 ANAPC7Q9UJX3 599 aa10.46□□□□□ -0.74
CSDE1-217ENST00000534699 POM121BA6NF01 834 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 J3KR12 359 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 RAD51BO15315 384 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 MAFKO60675 156 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 GYPCP04921 128 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 C6P13671 934 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 LSSP48449 732 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 INSM1Q01101 510 aaPredicted RBP10.45□□□□□ -0.74
CSDE1-217ENST00000534699 IL9RQ01113 521 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 PDE1CQ14123 709 aaPredicted RBP10.45□□□□□ -0.74
CSDE1-217ENST00000534699 CA9Q16790 459 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 ZSCAN23Q3MJ62 389 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 POM121L1PQ3SYA9 428 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 E4F1Q66K89 784 aaPredicted RBP10.45□□□□□ -0.74
CSDE1-217ENST00000534699 DHRS13Q6UX07 377 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 LIPIQ6XZB0 460 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 CNGA4Q8IV77 575 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 ZNF564Q8TBZ8 553 aaPredicted RBP10.45□□□□□ -0.74
CSDE1-217ENST00000534699 COQ10AQ96MF6 247 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 ZNF830Q96NB3 372 aaPredicted RBP10.45□□□□□ -0.74
CSDE1-217ENST00000534699 RBM15Q96T37 977 aaKnown RBP eCLIP10.45□□□□□ -0.743e-7■■■■□ 23.4
CSDE1-217ENST00000534699 LUC7LQ9NQ29 371 aaKnown RBP10.45□□□□□ -0.74
CSDE1-217ENST00000534699 MYO1AQ9UBC5 1043 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 APOBEC3BQ9UH17 382 aaKnown RBP10.45□□□□□ -0.74
CSDE1-217ENST00000534699 PCDHGA8Q9Y5G5 932 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 TMCO5BA8MYB1 307 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 MATN3O15232 486 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 PEX11BO96011 259 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 CPP00450 1065 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 RALGDSQ12967 914 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 IRF4Q15306 451 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 ASTE1Q2TB18 679 aaPredicted RBP10.45□□□□□ -0.74
CSDE1-217ENST00000534699 XKR5Q6UX68 686 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 USP45Q70EL2 814 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 LUZP1Q86V48 1076 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 ARL10Q8N8L6 244 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 AVL9Q8NBF6 648 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 THAP2Q9H0W7 228 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 PHPT1Q9NRX4 125 aaPredicted RBP10.45□□□□□ -0.74
CSDE1-217ENST00000534699 IFNKQ9P0W0 207 aa10.45□□□□□ -0.74
CSDE1-217ENST00000534699 A0A087X0T9 212 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms