RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 SPARCL1Q14515 664 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 CYTH1Q15438 398 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 LONRF1Q17RB8 773 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 SPANXN3Q5MJ09 141 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 EOGTQ5NDL2 527 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 HP1BP3Q5SSJ5 553 aaPredicted RBP10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 EMC10Q5UCC4 262 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 DENND5AQ6IQ26 1287 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 Q6ZS52 159 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 TPGS1Q6ZTW0 290 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 KIAA0907Q7Z7F0 614 aaPredicted RBP10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 TMEM135Q86UB9 458 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 MPP5Q8N3R9 675 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 PHTF2Q8N3S3 785 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 DNAAF3Q8N9W5 541 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 TERB1Q8NA31 727 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 SUMF1Q8NBK3 374 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 IPMKQ8NFU5 416 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 SPATA22Q8NHS9 363 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 UHMK1Q8TAS1 419 aaKnown RBP10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 FBF1Q8TES7 1133 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 TTC17Q96AE7 1141 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 LOXL4Q96JB6 756 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 FEM1CQ96JP0 617 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 NUDCD1Q96RS6 583 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 RANBP9Q96S59 729 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 PHOX2BQ99453 314 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 SEMA3CQ99985 751 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 FICDQ9BVA6 458 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 KIFC1Q9BW19 673 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 BBS2Q9BXC9 721 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 FSD1LQ9BXM9 530 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 FBRSL1Q9HCM7 1045 aaKnown RBP10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 SYBUQ9NX95 663 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 MOCS1Q9NZB8 636 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 VPS18Q9P253 973 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 RAB23Q9ULC3 237 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 MMP17Q9ULZ9 603 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 MAD1L1Q9Y6D9 718 aa10.16□□□□□ -0.78
LDLRAD3-206ENST00000534091 SCN8AQ9UQD0 1980 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 ZNF106Q9H2Y7 1883 aaKnown RBP10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 FAM186AA6NE01 2351 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 ATG2BQ96BY7 2078 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 FAM159BA6NKW6 160 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 INSIG1O15503 277 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 TIMM44O43615 452 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 RRP9O43818 475 aaKnown RBP10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 SNAP91O60641 907 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 TULP3O75386 442 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 APBB3O95704 486 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 FGF1P05230 155 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 POLBP06746 335 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 TYRP14679 529 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 HLA-DPA1P20036 260 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 HLA-FP30511 346 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 CD70P32970 193 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 CD86P42081 329 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 KIR2DL1P43626 348 aaPredicted RBP10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 MAPK8P45983 427 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 CSNK1DP48730 415 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 SERPINH1P50454 418 aaKnown RBP10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 VASPP50552 380 aaPredicted RBP10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 MAXP61244 160 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 ITKQ08881 620 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 CRYMQ14894 314 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 EIF4HQ15056 248 aaKnown RBP10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 PCID2Q5JVF3 399 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 LAIR1Q6GTX8 287 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 GRAMD4Q6IC98 578 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 ADGRD1Q6QNK2 874 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 ASCL5Q7RTU5 278 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 TMEM25Q86YD3 366 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 APCDD1Q8J025 514 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 RPLP0P6Q8NHW5 317 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 FAM76AQ8TAV0 307 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 SLC44A1Q8WWI5 657 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 PEX13Q92968 403 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 CFAP36Q96G28 342 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 ABCB8Q9NUT2 735 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 UBP1Q9NZI7 540 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 SAMD15Q9P1V8 674 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 PSMC3IPQ9P2W1 217 aaPredicted RBP10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 LHX3Q9UBR4 397 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 ZNF180Q9UJW8 692 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 INTS6Q9UL03 887 aaKnown RBP10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 CLEC4EQ9ULY5 219 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 HS3ST2Q9Y278 367 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 ACTL7BQ9Y614 415 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 R4GN57 208 aa10.15□□□□□ -0.78
LDLRAD3-206ENST00000534091 WDFY4Q6ZS81 3184 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 SPAG17Q6Q759 2223 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 MUC22E2RYF6 1773 aaPredicted RBP10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 TBC1D3BA6NDS4 549 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 NEDD8-MDP1E9PL57 170 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 USP12O75317 370 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 PMPCBO75439 489 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 ATXN1LP0C7T5 689 aaKnown RBP10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 PABPC1P11940 636 aaKnown RBP10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 HNRNPLP14866 589 aaKnown RBP eCLIP10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 DGKGP49619 791 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms