RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 JCHAINP01591 159 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 PRKCGP05129 697 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 CEACAM1P13688 526 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 ITIH2P19823 946 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 CTNNA1P35221 906 aaKnown RBP13.48□□□□□ -0.25
CAPN1-227ENST00000533909 CDKN2BP42772 138 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 EPHB1P54762 984 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 CLDN2P57739 230 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 IL9RQ01113 521 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 SLC10A2Q12908 348 aaPredicted RBP13.48□□□□□ -0.25
CAPN1-227ENST00000533909 ZNF423Q2M1K9 1284 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 PRAMEF14Q5SWL7 426 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 ARMC12Q5T9G4 340 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 PEX26Q7Z412 305 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 PGBD5Q8N414 524 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 TEX26Q8N6G2 289 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 UBL4BQ8N7F7 174 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 TMEM145Q8NBT3 493 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 LRRN4Q8WUT4 740 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 ASB12Q8WXK4 309 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 MAML1Q92585 1016 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 ANP32BQ92688 251 aaKnown RBP13.48□□□□□ -0.25
CAPN1-227ENST00000533909 P3H4Q92791 437 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 FATE1Q969F0 183 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 TSGA10Q9BZW7 698 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 SALL4Q9UJQ4 1053 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 AMFRQ9UKV5 643 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 PCDHGB2Q9Y5G2 931 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 HS3ST3A1Q9Y663 406 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 CABIN1Q9Y6J0 2220 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 KCNK1O00180 336 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 FLRT2O43155 660 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 ARHGAP6O43182 974 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 SPINT1O43278 529 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 SH3BP5O60239 455 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 ITGAVP06756 1048 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 ELFN1P0C7U0 828 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 C6P13671 934 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 CD59P13987 128 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 TGM2P21980 687 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 CTNNA2P26232 953 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 MMP12P39900 470 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 RABIFP47224 123 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 MARCKSL1P49006 195 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 LIG3P49916 1009 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 THOP1P52888 689 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 RWDD2BP57060 319 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 COPS2P61201 443 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 SEMG2Q02383 582 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 PPIDQ08752 370 aaKnown RBP13.47□□□□□ -0.25
CAPN1-227ENST00000533909 TMEM52BQ4KMG9 183 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 NPNTQ6UXI9 565 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 KYAT3Q6YP21 454 aaKnown RBP13.47□□□□□ -0.25
CAPN1-227ENST00000533909 GCNT7Q6ZNI0 430 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 Q6ZSR6 202 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 USP45Q70EL2 814 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 DCP2Q8IU60 420 aaKnown RBP13.47□□□□□ -0.25
CAPN1-227ENST00000533909 DENND6BQ8NEG7 585 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 OR13H1Q8NG92 308 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 RHBDD1Q8TEB9 315 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 KRT35Q92764 455 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 VOPP1Q96AW1 172 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 ECHDC3Q96DC8 303 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 LENG8Q96PV6 779 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-227ENST00000533909 FERMT1Q9BQL6 677 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 ERVMER34-1Q9H9K5 563 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 GRPEL1Q9HAV7 217 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 PCDHA3Q9Y5H8 950 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 RAI2Q9Y5P3 530 aa13.47□□□□□ -0.25
CAPN1-227ENST00000533909 CEP295Q9C0D2 2601 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 hCG_1818297A0A087WSY0 165 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 A0A1B0GTQ1 180 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 GRID2IPA4D2P6 1211 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 A8MX80 341 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 TRAFD1O14545 582 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-227ENST00000533909 KRT86O43790 486 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 HLA-DQB2P05538 268 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 CYP2A6P11509 494 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-227ENST00000533909 CR2P20023 1033 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 GRK6P43250 576 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 SIM1P81133 766 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-227ENST00000533909 DSC2Q02487 901 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 TRAF2Q12933 501 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 LRRC14Q15048 493 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 ACOX1Q15067 660 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 HS1BP3Q53T59 392 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 DPPA4Q7L190 304 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 PIP4P1Q86T03 277 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 ZSWIM9Q86XI8 627 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 TFB1MQ8WVM0 346 aaKnown RBP13.46□□□□□ -0.25
CAPN1-227ENST00000533909 HAUS1Q96CS2 278 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 HEMGNQ9BXL5 484 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 PHTF1Q9UMS5 762 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 COQ6Q9Y2Z9 468 aa13.46□□□□□ -0.25
CAPN1-227ENST00000533909 DNAH14Q0VDD8 3507 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 POM121BA6NF01 834 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 MIF4GDA9UHW6 222 aaKnown RBP13.45□□□□□ -0.26
CAPN1-227ENST00000533909 GIPC1O14908 333 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 RAD51BO15315 384 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 MTSS1O43312 755 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms