RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 SQORQ9Y6N5 450 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 LOC285095A0A1B0GVY8 99 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 MEIS3P2A8K0S8 358 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 TMX2-CTNND1H3BSU7 103 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 AIM2O14862 343 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 MATN3O15232 486 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 HLA-DQB2P05538 268 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 MYL3P08590 195 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 GNAO1P09471 354 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 PDGFRBP09619 1106 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 FDXRP22570 491 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 AKAP5P24588 427 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 CDKN2DP55273 166 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 PSME3P61289 254 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 POU4F1Q01851 419 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 PLOD1Q02809 727 aaPredicted RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 PRKCQQ04759 706 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 MGAT3Q09327 533 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 GRSF1Q12849 480 aaKnown RBP eCLIP4.45□□□□□ -1.7
CTSC-208ENST00000533897 GLRA4Q5JXX5 417 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 NOTUMQ6P988 496 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 TRIM67Q6ZTA4 783 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 TAC4Q86UU9 113 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 FAM35AQ86V20 835 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 ADGRG5Q8IZF4 528 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 SPATA22Q8NHS9 363 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 TRPC4APQ8TEL6 797 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 ITFG2Q969R8 447 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 ROPN1LQ96C74 230 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 IMP4Q96G21 291 aaKnown RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 MYRFLQ96LU7 910 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 PPP1R16BQ96T49 567 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 GRIP2Q9C0E4 1043 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 MRPL46Q9H2W6 279 aaKnown RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 EFCAB1Q9HAE3 211 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 NTN4Q9HB63 628 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 VCX3AQ9NNX9 186 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 C20orf96Q9NUD7 363 aaPredicted RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 CPSF2Q9P2I0 782 aaKnown RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 PTBP2Q9UKA9 531 aaKnown RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 CDYLQ9Y232 598 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 NAALAD2Q9Y3Q0 740 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 FAM95CA0A1B0GW59 222 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 AP3B1O00203 1094 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 ZSCAN9O15535 394 aaPredicted RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 S1PR4O95977 384 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 MT-CYBP00156 380 aaPredicted RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 SMIM10L2AP0DMW4 78 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 SMIM10L2BP0DMW5 78 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 IMPDH1P20839 514 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 VARSP26640 1264 aaKnown RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 POLR2IP36954 125 aaKnown RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 TAF6P49848 677 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 NKX3-2P78367 333 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 IFRD2Q12894 506 aaPredicted RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 KCTD2Q14681 263 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 SV2CQ496J9 727 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 CFAP157Q5JU67 520 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 RARS2Q5T160 578 aaKnown RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 POTEHQ6S545 545 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 PGBD5Q8N414 524 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 APPL2Q8NEU8 664 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 OR6B3Q8NGW1 331 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 NMD3Q96D46 503 aaKnown RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 SLC39A13Q96H72 371 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 MAML3Q96JK9 1138 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 TBL1YQ9BQ87 522 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 BTBD2Q9BX70 525 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 ULBP1Q9BZM6 244 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 GLOD4Q9HC38 313 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 SDR39U1Q9NRG7 319 aaPredicted RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 TMLHEQ9NVH6 421 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 SMOXQ9NWM0 555 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 CMTM6Q9NX76 183 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 MIOSQ9NXC5 875 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 RRN3Q9NYV6 651 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 IL37Q9NZH6 218 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 FNIP2Q9P278 1114 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 RUVBL2Q9Y230 463 aaKnown RBP4.45□□□□□ -1.7
CTSC-208ENST00000533897 AKT3Q9Y243 479 aa4.45□□□□□ -1.7
CTSC-208ENST00000533897 TTC3P53804 2025 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 MYBPHLA2RUH7 354 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 NEMP2A6NFY4 417 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 GOLGA8TH3BQL2 631 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 LDB2O43679 373 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 TRMUO75648 421 aaKnown RBP4.44□□□□□ -1.7
CTSC-208ENST00000533897 JUNBP17275 347 aaPredicted RBP4.44□□□□□ -1.7
CTSC-208ENST00000533897 TPH1P17752 444 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 CAPN3P20807 821 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 ATP5F1P24539 256 aaPredicted RBP4.44□□□□□ -1.7
CTSC-208ENST00000533897 CHRNA4P43681 627 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 SH3BGRP55822 239 aaPredicted RBP4.44□□□□□ -1.7
CTSC-208ENST00000533897 SH3BP2P78314 561 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 SEMA3AQ14563 771 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 KIAA0040Q15053 153 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 ACAP2Q15057 778 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 CYBRD1Q53TN4 286 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 GTF2IRD2BQ6EKJ0 949 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 XAF1Q6GPH4 301 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms