RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 ARRDC2Q8TBH0 407 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 SLC26A7Q8TE54 656 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 TOP1MTQ969P6 601 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 PABPC5Q96DU9 382 aaKnown RBP12.03□□□□□ -0.48
ATM-222ENST00000533733 L3HYPDHQ96EM0 354 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 IFT43Q96FT9 208 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 BTBD9Q96Q07 612 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 TMEM175Q9BSA9 504 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 MRPL9Q9BYD2 267 aaKnown RBP12.03□□□□□ -0.48
ATM-222ENST00000533733 NUF2Q9BZD4 464 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 KLHL4Q9C0H6 718 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 MAGEH1Q9H213 219 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 MEAF6Q9HAF1 191 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 CYP4F11Q9HBI6 524 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 MAN1C1Q9NR34 630 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 PSMD13Q9UNM6 376 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 ARIH1Q9Y4X5 557 aaPredicted RBP12.03□□□□□ -0.48
ATM-222ENST00000533733 BUD23O43709 281 aaKnown RBP12.03□□□□□ -0.48
ATM-222ENST00000533733 SMIM24O75264 130 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 WISP3O95389 354 aaPredicted RBP12.03□□□□□ -0.48
ATM-222ENST00000533733 GLP2RO95838 553 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 MMP2P08253 660 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 IMPDH1P20839 514 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 EPHA3P29320 983 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 GMPRP36959 345 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 PSMD8P48556 350 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 DLG1Q12959 904 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 ART3Q13508 389 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 CSHL1Q14406 222 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 DDR2Q16832 855 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 SIRPB2Q5JXA9 342 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 C10orf120Q5SQS8 335 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 FBXL22Q6P050 247 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 CNSTQ6PJW8 725 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 TRAF7Q6Q0C0 670 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 IZUMO2Q6UXV1 221 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 SDCCAG8Q86SQ7 713 aaPredicted RBP12.03□□□□□ -0.48
ATM-222ENST00000533733 ZNF354CQ86Y25 554 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 DSELQ8IZU8 1212 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 SLC25A41Q8N5S1 370 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 CCNYL1Q8N7R7 359 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 TXNDC5Q8NBS9 432 aaKnown RBP12.03□□□□□ -0.48
ATM-222ENST00000533733 PDZD8Q8NEN9 1154 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 OR13J1Q8NGT2 312 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 RHEBL1Q8TAI7 183 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 BRSK1Q8TDC3 778 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 GATA6Q92908 595 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 RPRD1AQ96P16 312 aaPredicted RBP12.03□□□□□ -0.48
ATM-222ENST00000533733 TTLL2Q9BWV7 592 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 INTS10Q9NVR2 710 aaKnown RBP12.03□□□□□ -0.48
ATM-222ENST00000533733 UXTQ9UBK9 157 aaPredicted RBP12.03□□□□□ -0.48
ATM-222ENST00000533733 PPM1HQ9ULR3 514 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 VPS9D1Q9Y2B5 631 aa12.03□□□□□ -0.48
ATM-222ENST00000533733 CCDC78A2IDD5 438 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 A8MT66 165 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 F5H5T6 163 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 J3KR12 359 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 PFDN6O15212 129 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 ALDH2P05091 517 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 SERPINF2P08697 491 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 ATXN1LP0C7T5 689 aaKnown RBP12.02□□□□□ -0.49
ATM-222ENST00000533733 CCDC166P0CW27 439 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 HAPLN1P10915 354 aaPredicted RBP12.02□□□□□ -0.49
ATM-222ENST00000533733 ME2P23368 584 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 CHRNA4P43681 627 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 PGFP49763 221 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 SUOXP51687 545 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 CDC16Q13042 620 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 ALFQ53S48 1182 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 NXNQ6DKJ4 435 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 TMEM154Q6P9G4 183 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 ANKS3Q6ZW76 656 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 RAB44Q7Z6P3 723 aaPredicted RBP12.02□□□□□ -0.49
ATM-222ENST00000533733 TFAP2DQ7Z6R9 452 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 PDSS2Q86YH6 399 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 PELI3Q8N2H9 469 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.02□□□□□ -0.49
ATM-222ENST00000533733 LINC01599Q8WXQ3 324 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 PSMG2Q969U7 264 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 SPDL1Q96EA4 605 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 ARHGAP39Q9C0H5 1083 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 FAM192AQ9GZU8 254 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 WDR55Q9H6Y2 383 aaPredicted RBP12.02□□□□□ -0.49
ATM-222ENST00000533733 SYTL2Q9HCH5 934 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 GTSE1Q9NYZ3 720 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 EPS15L1Q9UBC2 864 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 NUDT5Q9UKK9 219 aa12.02□□□□□ -0.49
ATM-222ENST00000533733 SLC12A8A0AV02 714 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 MTMR11A4FU01 709 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 TMEM88BA6NKF7 163 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 SDHDO14521 159 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 NEMP1O14524 444 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 AIM2O14862 343 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 LDB2O43679 373 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 RPP40O75818 363 aaKnown RBP12.01□□□□□ -0.49
ATM-222ENST00000533733 CRTAMO95727 393 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 S1PR4O95977 384 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 PDHA1P08559 390 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 TACR2P21452 398 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 FDXRP22570 491 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms